RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	COPB2	P35606	906 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	FAM83B	Q5T0W9	1011 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	GMCL1P1	Q8NEA9	526 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	ATG4C	Q96DT6	458 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	SLC5A4	Q9NY91	659 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	ORC4	O43929	436 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	SLC25A27	O95847	323 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	CTDSPL2	Q05D32	466 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	FAM47A	Q5JRC9	791 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	USP6NL	Q92738	828 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	MOV10L1	Q9BXT6	1211 aa	Known RBP	28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	HMX1	Q9NP08	348 aa	Predicted RBP	28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	TOMM22	Q9NS69	142 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	PPP1R9A	Q9ULJ8	1098 aa		28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	CTDP1	Q9Y5B0	961 aa	Predicted RBP	28.64	■■■□□ 2.18
CNOT7-204	ENST00000518885	KIAA0100	Q14667	2235 aa	Known RBP	28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	RANBP6	O60518	1105 aa	Known RBP	28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	NDUFB10	O96000	172 aa		28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	NT5C2	P49902	561 aa		28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	CWC27	Q6UX04	472 aa	Known RBP	28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	ZNF589	Q86UQ0	364 aa	Predicted RBP	28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	U2AF1L4	Q8WU68	220 aa	Known RBP	28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	SLF1	Q9BQI6	1058 aa		28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	RNF41	Q9H4P4	317 aa	Predicted RBP	28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	RPTOR	Q8N122	1335 aa		28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	BRCA2	P51587	3418 aa		28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885		A0A0G2JMZ2	1700 aa		28.63	■■■□□ 2.17
CNOT7-204	ENST00000518885	SGPL1	O95470	568 aa		28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	GRB14	Q14449	540 aa		28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	PRPF38A	Q8NAV1	312 aa	Known RBP	28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	TRIB2	Q92519	343 aa		28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	PAK6	Q9NQU5	681 aa	Predicted RBP	28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	ADAMTS5	Q9UNA0	930 aa		28.62	■■■□□ 2.17
CNOT7-204	ENST00000518885	TTC22	Q5TAA0	569 aa		28.61	■■■□□ 2.17
CNOT7-204	ENST00000518885	NCAPG2	Q86XI2	1143 aa		28.61	■■■□□ 2.17
CNOT7-204	ENST00000518885	FEM1B	Q9UK73	627 aa		28.61	■■■□□ 2.17
CNOT7-204	ENST00000518885	STX8	Q9UNK0	236 aa		28.61	■■■□□ 2.17
CNOT7-204	ENST00000518885	VWA5A	O00534	786 aa		28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	TFRC	P02786	760 aa	Known RBP	28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	ERCC3	P19447	782 aa		28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	MFSD14C	Q5VZR4	134 aa		28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	DPP9	Q86TI2	863 aa		28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	ABRA	Q8N0Z2	381 aa		28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	DEFB118	Q96PH6	123 aa		28.6	■■■□□ 2.17
CNOT7-204	ENST00000518885	DOCK3	Q8IZD9	2030 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	HOXC6	P09630	235 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	FGR	P09769	529 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	SLFN13	Q68D06	897 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	MFSD6	Q6ZSS7	791 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	LRRC47	Q8N1G4	583 aa	Known RBP	28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	RUFY2	Q8WXA3	655 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	FBXO28	Q9NVF7	368 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	CTNNA3	Q9UI47	895 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	PLXNB2	O15031	1838 aa		28.59	■■■□□ 2.17
CNOT7-204	ENST00000518885	ZNF213	O14771	459 aa		28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	ZBED4	O75132	1171 aa		28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	FDX1	P10109	184 aa		28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	PRKAR2A	P13861	404 aa	Known RBP	28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	PDE4A	P27815	886 aa		28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	TMEM132B	Q14DG7	1078 aa		28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	PRPF38B	Q5VTL8	546 aa	Known RBP	28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	ISY1	Q9ULR0	285 aa	Known RBP	28.58	■■■□□ 2.17
CNOT7-204	ENST00000518885	RLF	Q13129	1914 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	FCER1A	P12319	257 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	BMP3	P12645	472 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	STAT3	P40763	770 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	RRP12	Q5JTH9	1297 aa	Known RBP	28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	RIOX2	Q8IUF8	465 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	SHISA4	Q96DD7	197 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	GMCL1	Q96IK5	515 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	NUP88	Q99567	741 aa	Predicted RBP	28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	DSCC1	Q9BVC3	393 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	MYH4	Q9Y623	1939 aa		28.57	■■■□□ 2.16
CNOT7-204	ENST00000518885	ADORA2A	P29274	412 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	AKNAD1	Q5T1N1	836 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	MAP3K21	Q5TCX8	1036 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	CHURC1	Q8WUH1	139 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	RAD50	Q92878	1312 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	HTATIP2	Q9BUP3	242 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	TEX13B	Q9BXU2	312 aa		28.56	■■■□□ 2.16
CNOT7-204	ENST00000518885	SLC1A4	P43007	532 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	HAND2	P61296	217 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	KCTD2	Q14681	263 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	FAM160B2	Q86V87	743 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	ANKLE1	Q8NAG6	615 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	STAG1	Q8WVM7	1258 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	ZNF236	Q9UL36	1845 aa		28.55	■■■□□ 2.16
CNOT7-204	ENST00000518885	FARP2	O94887	1054 aa	Predicted RBP	28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	STAT2	P52630	851 aa		28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	IK	Q13123	557 aa	Predicted RBP	28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	IMMT	Q16891	758 aa	Known RBP	28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	ESR2	Q92731	530 aa		28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	KIFC2	Q96AC6	838 aa		28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	CRISPLD2	Q9H0B8	497 aa		28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	TCP11L1	Q9NUJ3	509 aa		28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	PARP14	Q460N5	1801 aa		28.54	■■■□□ 2.16
CNOT7-204	ENST00000518885	CACNB2	Q08289	660 aa	Predicted RBP	28.53	■■■□□ 2.16
CNOT7-204	ENST00000518885	CCL14	Q16627	93 aa		28.53	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms