RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 TMOD4Q9NZQ9 345 aa8.89□□□□□ -0.99
PVT1-206ENST00000517838 PI4KBQ9UBF8 816 aa8.89□□□□□ -0.99
PVT1-206ENST00000517838 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
PVT1-206ENST00000517838 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.89□□□□□ -0.99
PVT1-206ENST00000517838 A0A1B0GUL7 405 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 USP17L10C9JJH3 530 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 GPR37O15354 613 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 SURF6O75683 361 aaKnown RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 CNMDO75829 334 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 IGHA2P01877 340 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 ASNSP08243 561 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 RTP1P59025 263 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 HSP90AB4PQ58FF6 505 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 PADI6Q6TGC4 694 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 METTL16Q86W50 562 aaKnown RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 CCAR1Q8IX12 1150 aaKnown RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 OTUD7AQ8TE49 926 aaPredicted RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 SH3RF3Q8TEJ3 882 aaPredicted RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 MYLIPQ8WY64 445 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 PAGR1Q9BTK6 254 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 SLKQ9H2G2 1235 aaPredicted RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 DNAJC18Q9H819 358 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 COPRSQ9NQ92 184 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 HMG20BQ9P0W2 317 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 DDX20Q9UHI6 824 aaKnown RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 NDUFB9Q9Y6M9 179 aa8.88□□□□□ -0.99
PVT1-206ENST00000517838 DDX60LQ5H9U9 1706 aaKnown RBP8.88□□□□□ -0.99
PVT1-206ENST00000517838 PNMA6EA0A0J9YXQ4 647 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 DNM1LO00429 736 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 SRGAP3O43295 1099 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 RAB11FIP3O75154 756 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 LDHCP07864 332 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 HSP90AA1P07900 732 aaKnown RBP8.87□□□□□ -0.99
PVT1-206ENST00000517838 GSPT1P15170 499 aaKnown RBP8.87□□□□□ -0.99
PVT1-206ENST00000517838 GSTO1P78417 241 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 SMAD3P84022 425 aaKnown RBP8.87□□□□□ -0.99
PVT1-206ENST00000517838 TFCP2Q12800 502 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 MFSD14CQ5VZR4 134 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 SLC39A5Q6ZMH5 540 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 TEX11Q8IYF3 940 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 TRPV1Q8NER1 839 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 LPAR1Q92633 364 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
PVT1-206ENST00000517838 BADQ92934 168 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 KCTD12Q96CX2 325 aaKnown RBP8.87□□□□□ -0.99
PVT1-206ENST00000517838 GPATCH3Q96I76 525 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 RAI14Q9P0K7 980 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 PRKAG2Q9UGJ0 569 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 ATP11BQ9Y2G3 1177 aa8.87□□□□□ -0.99
PVT1-206ENST00000517838 TRIM43BA6NCK2 446 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 SLC15A5A6NIM6 579 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 GDF11O95390 407 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 HOXC6P09630 235 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 SDSP20132 328 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 MX1P20591 662 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 CNGA1P29973 690 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 CYP2C19P33261 490 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 GJC2Q5T442 439 aaPredicted RBP8.86□□□□□ -0.99
PVT1-206ENST00000517838 FOXP4Q8IVH2 680 aaPredicted RBP8.86□□□□□ -0.99
PVT1-206ENST00000517838 SPATA5Q8NB90 893 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 NPLOC4Q8TAT6 608 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 GTF3C2Q8WUA4 911 aaPredicted RBP8.86□□□□□ -0.99
PVT1-206ENST00000517838 RILPL2Q969X0 211 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 TRIM43Q96BQ3 446 aaPredicted RBP8.86□□□□□ -0.99
PVT1-206ENST00000517838 DHX36Q9H2U1 1008 aaKnown RBP8.86□□□□□ -0.99
PVT1-206ENST00000517838 RABGAP1Q9Y3P9 1069 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 DOCK3Q8IZD9 2030 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 PHIPQ8WWQ0 1821 aa8.86□□□□□ -0.99
PVT1-206ENST00000517838 PLXNB2O15031 1838 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 MSCO60682 206 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 REC8O95072 547 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 FOSL2P15408 326 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 PDE1AP54750 535 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 ATP2B2Q01814 1243 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 GRB14Q14449 540 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 SNX17Q15036 470 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 THSD4Q6ZMP0 1018 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 SH3RF1Q7Z6J0 888 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 MAPKAPK5Q8IW41 473 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 TGFBRAP1Q8WUH2 860 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 KIF1BPQ96EK5 621 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
PVT1-206ENST00000517838 NEUROD6Q96NK8 337 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 IL1RAPL2Q9NP60 686 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 GINM1Q9NU53 330 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 BTBD7Q9P203 1132 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 RAPGEFL1Q9UHV5 662 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 PALD1Q9ULE6 856 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 ZBTB21Q9ULJ3 1066 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 AKAP2Q9Y2D5 859 aa8.85□□□□□ -0.99
PVT1-206ENST00000517838 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
PVT1-206ENST00000517838 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms