RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SMARCA1P28370 1054 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 SHMT1P34896 483 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 TYW1BQ6NUM6 668 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 FERMT2Q96AC1 680 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 TRIM5Q9C035 493 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 C10orf71Q711Q0 1435 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 STXBP3O00186 592 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 PNOCQ13519 176 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 DEFB132Q7Z7B7 95 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 METTL16Q86W50 562 aaKnown RBP30.35■■■□□ 2.45
COL13A1-210ENST00000517713 FAM177A1Q8N128 213 aaPredicted RBP30.35■■■□□ 2.45
COL13A1-210ENST00000517713 BPIFA3Q9BQP9 254 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 SERPINA10Q9UK55 444 aa30.35■■■□□ 2.45
COL13A1-210ENST00000517713 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.35■■■□□ 2.45
COL13A1-210ENST00000517713 GALNT17Q6IS24 598 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 PLA2G4DQ86XP0 818 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 EHD4Q9H223 541 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 USP17L5A8MUK1 530 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 POLR2DO15514 142 aaKnown RBP30.34■■■□□ 2.45
COL13A1-210ENST00000517713 ZNF75DP51815 510 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 ZFPM1Q8IX07 1006 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 AOPEPQ8N6M6 819 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 DAGLBQ8NCG7 672 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 CPVLQ9H3G5 476 aa30.34■■■□□ 2.45
COL13A1-210ENST00000517713 HOOK1Q9UJC3 728 aaKnown RBP30.34■■■□□ 2.45
COL13A1-210ENST00000517713 PPIP5K2O43314 1243 aa30.33■■■□□ 2.45
COL13A1-210ENST00000517713 M0R2N6 131 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 ATP2C1P98194 919 aaPredicted RBP30.32■■■□□ 2.44
COL13A1-210ENST00000517713 PTGDRQ13258 359 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 SARM1Q6SZW1 724 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 RRP36Q96EU6 259 aaKnown RBP30.32■■■□□ 2.44
COL13A1-210ENST00000517713 IDI2Q9BXS1 227 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 DHX36Q9H2U1 1008 aaKnown RBP30.32■■■□□ 2.44
COL13A1-210ENST00000517713 TTLL1O95922 423 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 PDHBP11177 359 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 CACNB3P54284 484 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 GRIPAP1Q4V328 841 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 TTLL6Q8N841 843 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 SPC24Q8NBT2 197 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 CLIP2Q9UDT6 1046 aa30.32■■■□□ 2.44
COL13A1-210ENST00000517713 GOLGA6L6A8MZA4 724 aa30.31■■■□□ 2.44
COL13A1-210ENST00000517713 MDM2Q00987 491 aaPredicted RBP30.31■■■□□ 2.44
COL13A1-210ENST00000517713 USP49Q70CQ1 688 aa30.31■■■□□ 2.44
COL13A1-210ENST00000517713 SERTAD1Q9UHV2 236 aa30.31■■■□□ 2.44
COL13A1-210ENST00000517713 EIF6P56537 245 aaKnown RBP30.3■■■□□ 2.44
COL13A1-210ENST00000517713 TCP10Q12799 353 aa30.3■■■□□ 2.44
COL13A1-210ENST00000517713 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.3■■■□□ 2.44
COL13A1-210ENST00000517713 LRRC47Q8N1G4 583 aaKnown RBP30.3■■■□□ 2.44
COL13A1-210ENST00000517713 FAM198AQ9UFP1 575 aa30.3■■■□□ 2.44
COL13A1-210ENST00000517713 PCDHA6Q9UN73 950 aa30.3■■■□□ 2.44
COL13A1-210ENST00000517713 PCDHA8Q9Y5H6 950 aa30.3■■■□□ 2.44
COL13A1-210ENST00000517713 ZNF500O60304 480 aaPredicted RBP30.3■■■□□ 2.44
COL13A1-210ENST00000517713 SEC63Q9UGP8 760 aaKnown RBP30.3■■■□□ 2.44
COL13A1-210ENST00000517713 CCDC194A0A1B0GVG4 234 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 YDJCA8MPS7 323 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 MCM7P33993 719 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 ASPRV1Q53RT3 343 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 ISM2Q6H9L7 571 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 RASGRP4Q8TDF6 673 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 CCDC12Q8WUD4 166 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-210ENST00000517713 NPM3O75607 178 aaKnown RBP30.29■■■□□ 2.44
COL13A1-210ENST00000517713 TPM3P06753 285 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 CCDC93Q567U6 631 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 HOMER1Q86YM7 354 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 CLEC10AQ8IUN9 316 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 FOXP4Q8IVH2 680 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-210ENST00000517713 PDILTQ8N807 584 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 CCDC17Q96LX7 622 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 ZNF830Q96NB3 372 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-210ENST00000517713 RIOX1Q9H6W3 641 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 VAT1LQ9HCJ6 419 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 PCDHA5Q9Y5H7 936 aa30.29■■■□□ 2.44
COL13A1-210ENST00000517713 FRMPD2Q68DX3 1309 aaPredicted RBP30.28■■■□□ 2.44
COL13A1-210ENST00000517713 MPHOSPH10O00566 681 aaKnown RBP30.28■■■□□ 2.44
COL13A1-210ENST00000517713 FOXN1O15353 648 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 SNHG28P0DPA3 235 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 NAPAP54920 295 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 KANK3Q6NY19 840 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 RTKN2Q8IZC4 609 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 EPSTI1Q96J88 318 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 UBA5Q9GZZ9 404 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 ZMYND12Q9H0C1 365 aa30.28■■■□□ 2.44
COL13A1-210ENST00000517713 ACTN4O43707 911 aaKnown RBP30.27■■■□□ 2.44
COL13A1-210ENST00000517713 POSTNQ15063 836 aa30.27■■■□□ 2.44
COL13A1-210ENST00000517713 PIGSQ96S52 555 aa30.27■■■□□ 2.44
COL13A1-210ENST00000517713 PI4KBQ9UBF8 816 aa30.27■■■□□ 2.44
COL13A1-210ENST00000517713 VWA3AA6NCI4 1184 aa30.27■■■□□ 2.44
COL13A1-210ENST00000517713 DDTLA6NHG4 134 aaPredicted RBP30.27■■■□□ 2.44
COL13A1-210ENST00000517713 SLC16A10Q8TF71 515 aa30.27■■■□□ 2.44
COL13A1-210ENST00000517713 SYMPKQ92797 1274 aaKnown RBP30.27■■■□□ 2.44
COL13A1-210ENST00000517713 DNAJC18Q9H819 358 aa30.27■■■□□ 2.44
COL13A1-210ENST00000517713 TTC12Q9H892 705 aaPredicted RBP30.27■■■□□ 2.44
COL13A1-210ENST00000517713 PPP4R3BQ5MIZ7 849 aa30.26■■■□□ 2.43
COL13A1-210ENST00000517713 DRC7Q8IY82 874 aa30.26■■■□□ 2.43
COL13A1-210ENST00000517713 GREB1LQ9C091 1923 aaPredicted RBP30.26■■■□□ 2.43
COL13A1-210ENST00000517713 SLURP2P0DP57 97 aa30.25■■■□□ 2.43
COL13A1-210ENST00000517713 ZSCAN29Q8IWY8 852 aaPredicted RBP30.25■■■□□ 2.43
COL13A1-210ENST00000517713 SIPA1L1O43166 1804 aa30.25■■■□□ 2.43
COL13A1-210ENST00000517713 CDC25BP30305 580 aa30.25■■■□□ 2.43
COL13A1-210ENST00000517713 CFAP100Q494V2 611 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms