RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 RNF208Q9H0X6 261 aa29.22■■■□□ 2.27
PVT1-204ENST00000517525 PPP1R9AQ9ULJ8 1098 aa29.22■■■□□ 2.27
PVT1-204ENST00000517525 TACC3Q9Y6A5 838 aa29.22■■■□□ 2.27
PVT1-204ENST00000517525 A0A0G2JMZ2 1700 aa29.22■■■□□ 2.27
PVT1-204ENST00000517525 PLXNB2O15031 1838 aa29.22■■■□□ 2.27
PVT1-204ENST00000517525 HOXC6P09630 235 aa29.21■■■□□ 2.27
PVT1-204ENST00000517525 FAM47AQ5JRC9 791 aa29.21■■■□□ 2.27
PVT1-204ENST00000517525 UNC93B1Q9H1C4 597 aa29.21■■■□□ 2.27
PVT1-204ENST00000517525 PAK6Q9NQU5 681 aaPredicted RBP29.21■■■□□ 2.27
PVT1-204ENST00000517525 STRNO43815 780 aa29.2■■■□□ 2.26
PVT1-204ENST00000517525 MYCP01106 439 aaPredicted RBP29.2■■■□□ 2.26
PVT1-204ENST00000517525 GSPT1P15170 499 aaKnown RBP29.2■■■□□ 2.26
PVT1-204ENST00000517525 NT5C2P49902 561 aa29.2■■■□□ 2.26
PVT1-204ENST00000517525 MAP2K5Q13163 448 aa29.2■■■□□ 2.26
PVT1-204ENST00000517525 GRB14Q14449 540 aa29.2■■■□□ 2.26
PVT1-204ENST00000517525 FAM83BQ5T0W9 1011 aa29.2■■■□□ 2.26
PVT1-204ENST00000517525 CWC27Q6UX04 472 aaKnown RBP29.2■■■□□ 2.26
PVT1-204ENST00000517525 PDE4DIPQ5VU43 2346 aa29.2■■■□□ 2.26
PVT1-204ENST00000517525 SLC34A2O95436 690 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 CYP2B6P20813 491 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 MAP3K21Q5TCX8 1036 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 TRIB2Q92519 343 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 APBA2Q99767 749 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 MROH8Q9H579 483 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 FBXO28Q9NVF7 368 aa29.19■■■□□ 2.26
PVT1-204ENST00000517525 VWA5AO00534 786 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 REPS2Q8NFH8 660 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 SHISA4Q96DD7 197 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 DSCC1Q9BVC3 393 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 INCENPQ9NQS7 918 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 IL17RBQ9NRM6 502 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 TCP11L1Q9NUJ3 509 aa29.18■■■□□ 2.26
PVT1-204ENST00000517525 TSPY2A6NKD2 308 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 SGPL1O95470 568 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 SLC25A27O95847 323 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 TMEM132BQ14DG7 1078 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 ABRAQ8N0Z2 381 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 SLF1Q9BQI6 1058 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 CWC22Q9HCG8 908 aaKnown RBP29.17■■■□□ 2.26
PVT1-204ENST00000517525 IVNS1ABPQ9Y6Y0 642 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 RPTORQ8N122 1335 aa29.17■■■□□ 2.26
PVT1-204ENST00000517525 ERCC3P19447 782 aa29.16■■■□□ 2.26
PVT1-204ENST00000517525 PRPF38AQ8NAV1 312 aaKnown RBP29.16■■■□□ 2.26
PVT1-204ENST00000517525 U2AF1L4Q8WU68 220 aaKnown RBP29.16■■■□□ 2.26
PVT1-204ENST00000517525 STAG1Q8WVM7 1258 aa29.16■■■□□ 2.26
PVT1-204ENST00000517525 GMCL1Q96IK5 515 aa29.16■■■□□ 2.26
PVT1-204ENST00000517525 PARP14Q460N5 1801 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 IGHA2P01877 340 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 COPB2P35606 906 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 AKNAD1Q5T1N1 836 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 RIOX2Q8IUF8 465 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 NUP88Q99567 741 aaPredicted RBP29.15■■■□□ 2.26
PVT1-204ENST00000517525 NBPF3Q9H094 633 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 CRISPLD2Q9H0B8 497 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 FEM1BQ9UK73 627 aa29.15■■■□□ 2.26
PVT1-204ENST00000517525 ZNF214Q9UL59 606 aaPredicted RBP29.15■■■□□ 2.26
PVT1-204ENST00000517525 TNRC18O15417 2968 aaPredicted RBP29.15■■■□□ 2.26
PVT1-204ENST00000517525 ATP2A1O14983 1001 aa29.14■■■□□ 2.26
PVT1-204ENST00000517525 RAD21O60216 631 aa29.14■■■□□ 2.26
PVT1-204ENST00000517525 RANBP6O60518 1105 aaKnown RBP29.14■■■□□ 2.26
PVT1-204ENST00000517525 ZKSCAN1P17029 563 aaPredicted RBP29.14■■■□□ 2.26
PVT1-204ENST00000517525 SLFN13Q68D06 897 aa29.14■■■□□ 2.26
PVT1-204ENST00000517525 UBE2Q1Q7Z7E8 422 aa29.14■■■□□ 2.26
PVT1-204ENST00000517525 LRRC47Q8N1G4 583 aaKnown RBP29.14■■■□□ 2.26
PVT1-204ENST00000517525 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.14■■■□□ 2.264e-6■■■□□ 17.4
PVT1-204ENST00000517525 RNF41Q9H4P4 317 aaPredicted RBP29.14■■■□□ 2.26
PVT1-204ENST00000517525 RAD50Q92878 1312 aa29.14■■■□□ 2.25
PVT1-204ENST00000517525 PLA2G6O60733 806 aa29.13■■■□□ 2.25
PVT1-204ENST00000517525 WDR78Q5VTH9 848 aa29.13■■■□□ 2.25
PVT1-204ENST00000517525 HMX1Q9NP08 348 aaPredicted RBP29.13■■■□□ 2.25
PVT1-204ENST00000517525 FDX1P10109 184 aa29.12■■■□□ 2.25
PVT1-204ENST00000517525 BMP3P12645 472 aa29.12■■■□□ 2.25
PVT1-204ENST00000517525 STAT3P40763 770 aa29.12■■■□□ 2.25
PVT1-204ENST00000517525 TRIM32Q13049 653 aa29.12■■■□□ 2.25
PVT1-204ENST00000517525 MFSD6Q6ZSS7 791 aa29.12■■■□□ 2.25
PVT1-204ENST00000517525 ZNF236Q9UL36 1845 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 BRCA2P51587 3418 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 ZNF213O14771 459 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 HAND2P61296 217 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 PLS1Q14651 629 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 DEFB118Q96PH6 123 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 CTNNA3Q9UI47 895 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 STX8Q9UNK0 236 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 MYH4Q9Y623 1939 aa29.11■■■□□ 2.25
PVT1-204ENST00000517525 NMT2O60551 498 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 CHMLP26374 656 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 ADORA2AP29274 412 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 CCL14Q16627 93 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 NCAPG2Q86XI2 1143 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 TBC1D10CQ8IV04 446 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 RUFY2Q8WXA3 655 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 TTC14Q96N46 770 aa29.1■■■□□ 2.25
PVT1-204ENST00000517525 PRKAR2AP13861 404 aaKnown RBP29.09■■■□□ 2.25
PVT1-204ENST00000517525 OAZ1P54368 228 aa29.09■■■□□ 2.25
PVT1-204ENST00000517525 CACNB2Q08289 660 aaPredicted RBP29.09■■■□□ 2.25
PVT1-204ENST00000517525 OLFML2BQ68BL8 750 aa29.09■■■□□ 2.25
PVT1-204ENST00000517525 CENPQQ7L2Z9 268 aaPredicted RBP29.09■■■□□ 2.25
PVT1-204ENST00000517525 TEX13BQ9BXU2 312 aa29.09■■■□□ 2.25
PVT1-204ENST00000517525 SLC38A10Q9HBR0 1119 aa29.09■■■□□ 2.25
PVT1-204ENST00000517525 SLC5A4Q9NY91 659 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms