RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 GDNFP39905 211 aa8.69□□□□□ -1.02
SCARNA1-201ENST00000517138 TAB3Q8N5C8 712 aaPredicted RBP8.69□□□□□ -1.02
SCARNA1-201ENST00000517138 TCTN2Q96GX1 697 aa8.69□□□□□ -1.02
SCARNA1-201ENST00000517138 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
SCARNA1-201ENST00000517138 TMEM59LQ9UK28 342 aa8.69□□□□□ -1.02
SCARNA1-201ENST00000517138 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 BIN1O00499 593 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 TRHRP34981 398 aaPredicted RBP8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 GIPRP48546 466 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 COL9A2Q14055 689 aaPredicted RBP8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 DCAF15Q66K64 600 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 SYTL5Q8TDW5 730 aaPredicted RBP8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 SHDQ96IW2 340 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 SRRTQ9BXP5 876 aaKnown RBP8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 FOXP3Q9BZS1 431 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 SP110Q9HB58 689 aa8.68□□□□□ -1.02
SCARNA1-201ENST00000517138 ZNF503-AS2A6NEH8 195 aa8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 SIGLEC6O43699 453 aa8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 TP53P04637 393 aaPredicted RBP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 ZGLP1P0C6A0 271 aa8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 EIF6P56537 245 aaKnown RBP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 AUHQ13825 339 aaKnown RBP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 ZPBP2Q6X784 338 aa8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 FAM169BQ8N8A8 192 aa8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 ASCC2Q9H1I8 757 aaPredicted RBP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 FBXL21Q9UKT6 434 aa8.67□□□□□ -1.02
SCARNA1-201ENST00000517138 CTSKP43235 329 aa8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 PMS1P54277 932 aaKnown RBP8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 ZSWIM9Q86XI8 627 aa8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 CCDC144CPQ8IYA2 1237 aa8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 PCDHB10Q9UN67 800 aa8.66□□□□□ -1.02
SCARNA1-201ENST00000517138 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 BBS9Q3SYG4 887 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 TIGD5Q53EQ6 642 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 ENOX1Q8TC92 643 aaKnown RBP8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 LIN37Q96GY3 246 aaPredicted RBP8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 KIRREL1Q96J84 757 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 SPATA32Q96LK8 384 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 C19orf44Q9H6X5 657 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 ZNF281Q9Y2X9 895 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 PCDHB12Q9Y5F1 795 aa8.65□□□□□ -1.02
SCARNA1-201ENST00000517138 A0A1W2PQH9 124 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 TMEM82A0PJX8 343 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 FKTNO75072 461 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 ATF4P18848 351 aaPredicted RBP8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 AFMP43652 599 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 KCNMB1Q16558 191 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 C7orf61Q8IZ16 206 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 ZNF655Q8N720 491 aaPredicted RBP8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 DHRS1Q96LJ7 313 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 G6PC3Q9BUM1 346 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 CAPN10Q9HC96 672 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 IGSF5Q9NSI5 407 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 TCFL5Q9UL49 500 aa8.64□□□□□ -1.03
SCARNA1-201ENST00000517138 EFEMP2O95967 443 aa8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 HPXP02790 462 aa8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 SYPP08247 313 aa8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 CRTC3Q6UUV7 619 aa8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 ZNF214Q9UL59 606 aaPredicted RBP8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 ZNF451Q9Y4E5 1061 aa8.63□□□□□ -1.03
SCARNA1-201ENST00000517138 GALK1P51570 392 aa8.62□□□□□ -1.03
SCARNA1-201ENST00000517138 PPP2R5EQ16537 467 aa8.62□□□□□ -1.03
SCARNA1-201ENST00000517138 CPLX3Q8WVH0 158 aa8.62□□□□□ -1.03
SCARNA1-201ENST00000517138 BRF1Q92994 677 aa8.62□□□□□ -1.03
SCARNA1-201ENST00000517138 KRTAP4-12Q9BQ66 201 aa8.62□□□□□ -1.03
SCARNA1-201ENST00000517138 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
SCARNA1-201ENST00000517138 CBFA2T2O43439 604 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 ZNF445P59923 1031 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 RNF111Q6ZNA4 994 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 LINC00116Q8NCU8 138 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 LINC01599Q8WXQ3 324 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 ANAPC16Q96DE5 110 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 KCNK12Q9HB15 430 aa8.61□□□□□ -1.03
SCARNA1-201ENST00000517138 NOTOA8MTQ0 251 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 GLI1P08151 1106 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 PCBP3P57721 371 aaKnown RBP8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 PDZD8Q8NEN9 1154 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 ABHD4Q8TB40 342 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 MYLIPQ8WY64 445 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 KLHL6Q8WZ60 621 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 GP6Q9HCN6 339 aa8.6□□□□□ -1.03
SCARNA1-201ENST00000517138 H0Y8X5 98 aa8.59□□□□□ -1.03
SCARNA1-201ENST00000517138 USP2O75604 605 aaPredicted RBP8.59□□□□□ -1.03
SCARNA1-201ENST00000517138 CD247P20963 164 aa8.59□□□□□ -1.03
SCARNA1-201ENST00000517138 CEBPAP49715 358 aaPredicted RBP8.59□□□□□ -1.03
SCARNA1-201ENST00000517138 GNPTABQ3T906 1256 aa8.59□□□□□ -1.03
SCARNA1-201ENST00000517138 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
SCARNA1-201ENST00000517138 PRR23BQ6ZRT6 265 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms