RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 KCNN1Q92952 543 aa4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 INTS4Q96HW7 963 aaKnown RBP4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 HDAC8Q9BY41 377 aa4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 EHMT1Q9H9B1 1298 aa4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 COPRSQ9NQ92 184 aa4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 GGT7Q9UJ14 662 aa4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 GPR160Q9UJ42 338 aa4.61□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ETV2O00321 342 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ZSCAN22P10073 491 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ENDOUP21128 410 aaKnown RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 KIR2DL1P43626 348 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 KIR2DL2P43627 348 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ZNF165P49910 485 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 APOBRQ0VD83 1088 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 MRPL58Q14197 206 aaKnown RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 LRRFIP1Q32MZ4 808 aaKnown RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 NBPF9Q3BBW0 867 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 TIGD5Q53EQ6 642 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 NBPF12Q5TAG4 269 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 NLRC3Q7RTR2 1065 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 GIPC2Q8TF65 315 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 LINC01599Q8WXQ3 324 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 CNNM2Q9H8M5 875 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ZNF281Q9Y2X9 895 aa4.6□□□□□ -1.67
SCARNA16.2-201ENST00000516520 CLEC3AO75596 197 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 RPL10P27635 214 aaKnown RBP4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 PDE6BP35913 854 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 LINC00310P59036 64 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 LCNL1Q6ZST4 164 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 WAPLQ7Z5K2 1190 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ZNF605Q86T29 641 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 AMIGO3Q86WK7 504 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 LINC00116Q8NCU8 138 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 TCTN2Q96GX1 697 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 G6PC3Q9BUM1 346 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 FOXP3Q9BZS1 431 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 MCOLN1Q9GZU1 580 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 ZMYM5Q9UJ78 669 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 TCFL5Q9UL49 500 aa4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 SMG5Q9UPR3 1016 aaKnown RBP4.59□□□□□ -1.67
SCARNA16.2-201ENST00000516520 TEX51A0A1B0GUA7 166 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 OR14I1A6ND48 311 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 MEIS3P2A8K0S8 358 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SIGLEC6O43699 453 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 NRDCO43847 1150 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 NUAK1O60285 661 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 PSPNO60542 156 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 CRKP46108 304 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SLC14A2Q15849 920 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SEZ6Q53EL9 994 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 TMEM132EQ6IEE7 984 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 GK5Q6ZS86 529 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 NKD1Q969G9 470 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 ATG4CQ96DT6 458 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 MAP6Q96JE9 813 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 NT5C1AQ9BXI3 368 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 ZNF552Q9H707 407 aaPredicted RBP4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 KCNK12Q9HB15 430 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 CRTAC1Q9NQ79 661 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 UBP1Q9NZI7 540 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 ADAMTS1Q9UHI8 967 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 RAPGEFL1Q9UHV5 662 aa4.58□□□□□ -1.68
SCARNA16.2-201ENST00000516520 HRKO00198 91 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 TNFRSF10CO14798 259 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 USP2O75604 605 aaPredicted RBP4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SYPP08247 313 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 NME1P15531 152 aaKnown RBP4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 POLR2BP30876 1174 aaKnown RBP4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 MCM4P33991 863 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 DLG4P78352 724 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 OLFML2BQ68BL8 750 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 CEP128Q6ZU80 1094 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 TMC3Q7Z5M5 1100 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 NLRX1Q86UT6 975 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 KIAA0825Q8IV33 1275 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SLITRK4Q8IW52 837 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SHISA4Q96DD7 197 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 FCRL2Q96LA5 508 aaPredicted RBP4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 MKRN2Q9H000 416 aaKnown RBP4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 PRR13Q9NZ81 148 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 EBF1Q9UH73 591 aa4.57□□□□□ -1.68
SCARNA16.2-201ENST00000516520 MYOCOSA0A1B0GUC4 107 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 TMEM82A0PJX8 343 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 RFXAPO00287 272 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 PRAMEF1O95521 474 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 IMPDH2P12268 514 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 CLCQ05315 142 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SNW1Q13573 536 aaKnown RBP4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 BBS9Q3SYG4 887 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 ADGRF1Q5T601 910 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 SPON2Q9BUD6 331 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 PRDM14Q9GZV8 571 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 CHST7Q9NS84 486 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 TNFRSF10DQ9UBN6 386 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 PCDHB12Q9Y5F1 795 aa4.56□□□□□ -1.68
SCARNA16.2-201ENST00000516520 FKTNO75072 461 aa4.55□□□□□ -1.68
SCARNA16.2-201ENST00000516520 PNLIPP16233 465 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms