RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FBLN5Q9UBX5 448 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 TESQ9UGI8 421 aaKnown RBP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 FNDC3AQ9Y2H6 1198 aaKnown RBP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 A0A096LPE4 126 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 A0A1W2PPZ6 126 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 PRR23D1E9PI22 279 aaPredicted RBP0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 B3GALT4O96024 378 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 PRR23D2P0DMB1 279 aaPredicted RBP0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 MAKP20794 623 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 ERVK-24P63145 666 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 TEKQ02763 1124 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 DUSP4Q13115 394 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 FHL3Q13643 280 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 SURF1Q15526 300 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 TARBP2Q15633 366 aaKnown RBP0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 SPRED3Q2MJR0 410 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 LAIR1Q6GTX8 287 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 SIX5Q8N196 739 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 LARGE2Q8N3Y3 721 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 IL17DQ8TAD2 202 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 SMG7Q92540 1137 aaKnown RBP0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 ANKS1AQ92625 1134 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 CLIP3Q96DZ5 547 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 DDX11Q96FC9 970 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 ADOQ96SZ5 270 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 LATS2Q9NRM7 1088 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZNF580Q9UK33 172 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 HCFC2Q9Y5Z7 792 aa0.76□□□□□ -2.29
RNU6-542P-201ENST00000516405 ANKRD33BA6NCL7 494 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 PALM3A6NDB9 673 aaPredicted RBP0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 MYADML2A6NDP7 307 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZFPL1O95159 310 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 TNFRSF1BP20333 461 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 GJA4P35212 333 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 GRIA4P48058 902 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 TUBA3CQ13748 450 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 PPM1JQ5JR12 505 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 PDE12Q6L8Q7 609 aaKnown RBP0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 TUBA3EQ6PEY2 450 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 C1QL2Q7Z5L3 287 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 TSPYL5Q86VY4 417 aaPredicted RBP0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 TRIM50Q86XT4 487 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 GPR152Q8TDT2 470 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZNF483Q8TF39 744 aaPredicted RBP0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZNHIT2Q9UHR6 403 aa0.75□□□□□ -2.29
RNU6-542P-201ENST00000516405 CACNA1IQ9P0X4 2223 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZAR1LA6NP61 321 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 FOXS1O43638 330 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 LRIG2O94898 1065 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 KIR3DL1P43629 444 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 ATP1A2P50993 1020 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 EPHB4P54760 987 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 KRTAP10-3P60369 221 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 TMEM62Q0P6H9 643 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 KRTAP13-3Q3SY46 172 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 C9orf131Q5VYM1 1079 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 MCTP2Q6DN12 878 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZC3H14Q6PJT7 736 aaKnown RBP0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 CEP128Q6ZU80 1094 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 C1orf210Q8IVY1 113 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 OGFOD1Q8N543 542 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZNF594Q96JF6 807 aaPredicted RBP0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 MIPEPQ99797 713 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 MEGF9Q9H1U4 602 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 MDFICQ9P1T7 246 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 CEP131Q9UPN4 1083 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 TBC1D2BQ9UPU7 963 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 FRMD4BQ9Y2L6 1034 aa0.74□□□□□ -2.29
RNU6-542P-201ENST00000516405 DNAJC9-AS1A6NH13 148 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 USP17L5A8MUK1 530 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 TULP1O00294 542 aaPredicted RBP0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 EREGO14944 169 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 MAPKAPK2P49137 400 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 PPP2CBP62714 309 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 PPP2CAP67775 309 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 FAAP100Q0VG06 881 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 FOXF2Q12947 444 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 AP3B2Q13367 1082 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 SLC14A2Q15849 920 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 FAM26FQ5R3K3 315 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 TTLL7Q6ZT98 887 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 HDXQ7Z353 690 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZNF438Q7Z4V0 828 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 FAM124AQ86V42 546 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 TXNDC5Q8NBS9 432 aaKnown RBP0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZBTB9Q96C00 473 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 SYTL4Q96C24 671 aaPredicted RBP0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 AK7Q96M32 723 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 HINFPQ9BQA5 517 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 GPR62Q9BZJ7 368 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 PRDM13Q9H4Q3 707 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 TNFRSF12AQ9NP84 129 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 KRT82Q9NSB4 513 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 FAN1Q9Y2M0 1017 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 COX11Q9Y6N1 276 aa0.73□□□□□ -2.29
RNU6-542P-201ENST00000516405 GCP02774 474 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 GSTP1P09211 210 aaKnown RBP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZAP70P43403 619 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 KIR2DL1P43626 348 aaPredicted RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms