RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PPFIBP1Q86W92 1011 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 CNTD1Q8N815 330 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 ELMO3Q96BJ8 720 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 ABHD17AQ96GS6 310 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 RHOBTB2Q9BYZ6 727 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 UBE2OQ9C0C9 1292 aaKnown RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 IFT22Q9H7X7 185 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 OSGEPQ9NPF4 335 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 SUCOQ9UBS9 1254 aaKnown RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 ATXN7L1Q9ULK2 861 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 MAPKBP1O60336 1514 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 CHURC1-FNTBB4DL54 471 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 PRPF3O43395 683 aaKnown RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 OPA1O60313 960 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 ZEB2O60315 1214 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 FOSP01100 380 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 EPHX1P07099 455 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 U2AF1L5P0DN76 240 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 ZSCAN20P17040 1043 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 BPIP17213 487 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 GABREP78334 506 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 TMPRSS15P98073 1019 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 U2AF1Q01081 240 aaKnown RBP eCLIP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 LRRN4CLQ8ND94 238 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 JPH3Q8WXH2 748 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 USP7Q93009 1102 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 HAUS7Q99871 368 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 LACRTQ9GZZ8 138 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 IGFLR1Q9H665 355 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 SH2B1Q9NRF2 756 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-211ENST00000515289 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 NDOR1Q9UHB4 597 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 ABCC10Q5T3U5 1492 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 AKNAQ7Z591 1439 aa8.61□□□□□ -1.03
NPHP3-211ENST00000515289 H3BRJ5 948 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 KPNA6O60684 536 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 FBXO21O94952 628 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 APBA3O96018 575 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 CYP11A1P05108 521 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 PGRP06401 933 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 IGFALSP35858 605 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 FLT3P36888 993 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 MORC3Q14149 939 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 ZNF460Q14592 562 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 HEATR6Q6AI08 1181 aaKnown RBP8.6□□□□□ -1.03
NPHP3-211ENST00000515289 FAM35AQ86V20 835 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 SLFN12Q8IYM2 578 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 ACSF2Q96CM8 615 aaPredicted RBP8.6□□□□□ -1.03
NPHP3-211ENST00000515289 SLC6A18Q96N87 628 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
NPHP3-211ENST00000515289 PNMA2Q9UL42 364 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 APOBEC2Q9Y235 224 aaKnown RBP8.6□□□□□ -1.03
NPHP3-211ENST00000515289 KIF14Q15058 1648 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 UACAQ9BZF9 1416 aa8.6□□□□□ -1.03
NPHP3-211ENST00000515289 TNKSO95271 1327 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 WDHD1O75717 1129 aaPredicted RBP8.59□□□□□ -1.03
NPHP3-211ENST00000515289 F2P00734 622 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 CPB1P15086 417 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 EPHA1P21709 976 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 GRK4P32298 578 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 GRIA2P42262 883 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 DGKGP49619 791 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
NPHP3-211ENST00000515289 GSTM4Q03013 218 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 FGD2Q7Z6J4 655 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 TMEM192Q8IY95 271 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 ZNF513Q8N8E2 541 aaPredicted RBP8.59□□□□□ -1.03
NPHP3-211ENST00000515289 NRSN2Q9GZP1 204 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 KLHL25Q9H0H3 589 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 LUC7LQ9NQ29 371 aaKnown RBP8.59□□□□□ -1.03
NPHP3-211ENST00000515289 OBP2AQ9NY56 170 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 APEX2Q9UBZ4 518 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 NAIPQ13075 1403 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 ABCC2Q92887 1545 aa8.59□□□□□ -1.03
NPHP3-211ENST00000515289 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
NPHP3-211ENST00000515289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-211ENST00000515289 NEMP1O14524 444 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 JMJD7P0C870 316 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 TRIM27P14373 513 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 SETDB1Q15047 1291 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 C10orf62Q5T681 223 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-211ENST00000515289 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 OR2W6PQ8NHA6 318 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 PI4K2BQ8TCG2 481 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 COG1Q8WTW3 980 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 PPM1EQ8WY54 764 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 PPP1R14AQ96A00 147 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 ZNF512BQ96KM6 892 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms