RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 EFCAB14O75071 495 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 DNAJC8O75937 253 aaPredicted RBP10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 LRIG2O94898 1065 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 C6orf222P0C671 652 aaPredicted RBP10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 CD247P20963 164 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 GABREP78334 506 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 SOX4Q06945 474 aaPredicted RBP10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 UBE3DQ7Z6J8 389 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 TRIM59Q8IWR1 403 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 C7orf61Q8IZ16 206 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 SVOPQ8N4V2 548 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 PPP1R14AQ96A00 147 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 MKRN2Q9H000 416 aaKnown RBP10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 ZNF451Q9Y4E5 1061 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
LDHBP3-201ENST00000514909 TIAF1O95411 115 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 EYA4O95677 639 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 EPHB1P54762 984 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 DDX46Q7L014 1031 aaKnown RBP10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 ARHGEF39Q8N4T4 335 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 UBR7Q8N806 425 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 VWCEQ96DN2 955 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 PIDD1Q9HB75 910 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 TCEAL9Q9UHQ7 104 aa10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
LDHBP3-201ENST00000514909 WASHC2CQ9Y4E1 1318 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 CCDC194A0A1B0GVG4 234 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 FAM83GA6ND36 823 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 SHISA8B8ZZ34 492 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 ITGA4P13612 1032 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 GRIA2P42262 883 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 AUHQ13825 339 aaKnown RBP10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 CNNM4Q6P4Q7 775 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 NECAB2Q7Z6G3 386 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 ADAT2Q7Z6V5 191 aaKnown RBP10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 FMR1NBQ8N0W7 255 aaPredicted RBP10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 ATL2Q8NHH9 583 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 DNAJB8Q8NHS0 232 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 C8orf48Q96LL4 319 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 GP6Q9HCN6 339 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 PRR13Q9NZ81 148 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 CEP131Q9UPN4 1083 aa10.41□□□□□ -0.74
LDHBP3-201ENST00000514909 WISP1O95388 367 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 BCRP11274 1271 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 DGKGP49619 791 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 DHCR24Q15392 516 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 ARMCX6Q7L4S7 300 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 CCDC136Q96JN2 1154 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 ZNF512BQ96KM6 892 aaPredicted RBP10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 AKT3Q9Y243 479 aa10.4□□□□□ -0.74
LDHBP3-201ENST00000514909 TBX1O43435 398 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 ALDH1L1O75891 902 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 ASLP04424 464 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 RAC1P63000 192 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 MAP4K2Q12851 820 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 BRAPQ7Z569 592 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 SLC7A14Q8TBB6 771 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 CCDC140Q96MF4 163 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 KREMEN1Q96MU8 473 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 ASPNQ9BXN1 380 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 PCOLCE2Q9UKZ9 415 aa10.39□□□□□ -0.75
LDHBP3-201ENST00000514909 A0A0A0MRY4 1105 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 GRB10Q13322 594 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 TRAPPC3LQ5T215 181 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 ACAD11Q709F0 780 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 DYMQ7RTS9 669 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 SMYD4Q8IYR2 804 aaPredicted RBP10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 FBXL18Q96ME1 805 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 SLC52A2Q9HAB3 445 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 CGGBP1Q9UFW8 167 aaPredicted RBP10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 FHOD1Q9Y613 1164 aa10.38□□□□□ -0.75
LDHBP3-201ENST00000514909 DLX3O60479 287 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 AMPD1P23109 780 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 ASPAP45381 313 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 GUCY2FP51841 1108 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 TBX4P57082 545 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 NFE2Q16621 373 aaPredicted RBP10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 MAMDC2Q7Z304 686 aaPredicted RBP10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 C2CD4AQ8NCU7 369 aaPredicted RBP10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 SYTL5Q8TDW5 730 aaPredicted RBP10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 RNF141Q8WVD5 230 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 BTN2A2Q8WVV5 523 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 KCTD13Q8WZ19 329 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 PTPRN2Q92932 1015 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 LGR4Q9BXB1 951 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 NDOR1Q9UHB4 597 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 ACTL7BQ9Y614 415 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 PHLDB1Q86UU1 1377 aa10.37□□□□□ -0.75
LDHBP3-201ENST00000514909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 KRBA1A5PL33 1030 aa10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 RNGTTO60942 597 aaKnown RBP10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 GFRA1P56159 465 aa10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 ANKRD34AQ69YU3 496 aa10.36□□□□□ -0.75
LDHBP3-201ENST00000514909 LYPD4Q6UWN0 246 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms