RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 ALX1Q15699 326 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 PAK6Q9NQU5 681 aaPredicted RBP16.51■□□□□ 0.23
ITGA3-214ENST00000514834 FLRT1Q9NZU1 646 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 SGPL1O95470 568 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
ITGA3-214ENST00000514834 CCNA1P78396 465 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 PDE4BQ07343 736 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 MAP2K5Q13163 448 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 PLS1Q14651 629 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 UBE2Q1Q7Z7E8 422 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
ITGA3-214ENST00000514834 NPLOC4Q8TAT6 608 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 SOCS4Q8WXH5 440 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 MKL1Q969V6 931 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.5■□□□□ 0.23
ITGA3-214ENST00000514834 IL17RBQ9NRM6 502 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 ANAPC4Q9UJX5 808 aa16.5■□□□□ 0.23
ITGA3-214ENST00000514834 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 TSPY3P0CV98 308 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 TSPY8P0CW00 308 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
ITGA3-214ENST00000514834 ERCC3P19447 782 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 RGS2P41220 211 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 HAND2P61296 217 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
ITGA3-214ENST00000514834 MAP3K21Q5TCX8 1036 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
ITGA3-214ENST00000514834 TICAM2Q86XR7 235 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 REPS2Q8NFH8 660 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 IL25Q9H293 177 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
ITGA3-214ENST00000514834 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
ITGA3-214ENST00000514834 VWA5AO00534 786 aa16.48■□□□□ 0.23
ITGA3-214ENST00000514834 TTLL1O95922 423 aa16.48■□□□□ 0.23
ITGA3-214ENST00000514834 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
ITGA3-214ENST00000514834 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
ITGA3-214ENST00000514834 GRB14Q14449 540 aa16.48■□□□□ 0.23
ITGA3-214ENST00000514834 RASGRP2Q7LDG7 609 aa16.48■□□□□ 0.23
ITGA3-214ENST00000514834 APBA2Q99767 749 aa16.48■□□□□ 0.23
ITGA3-214ENST00000514834 CRISPLD2Q9H0B8 497 aa16.48■□□□□ 0.23
ITGA3-214ENST00000514834 ZNFX1Q9P2E3 1918 aaKnown RBP16.48■□□□□ 0.23
ITGA3-214ENST00000514834 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
ITGA3-214ENST00000514834 COBLO75128 1261 aa16.47■□□□□ 0.23
ITGA3-214ENST00000514834 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
ITGA3-214ENST00000514834 FGRP09769 529 aa16.47■□□□□ 0.23
ITGA3-214ENST00000514834 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
ITGA3-214ENST00000514834 CCND3P30281 292 aaPredicted RBP16.47■□□□□ 0.23
ITGA3-214ENST00000514834 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
ITGA3-214ENST00000514834 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
ITGA3-214ENST00000514834 HMX1Q9NP08 348 aaPredicted RBP16.47■□□□□ 0.23
ITGA3-214ENST00000514834 CEP290O15078 2479 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 ORC4O43929 436 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 RANBP6O60518 1105 aaKnown RBP16.46■□□□□ 0.23
ITGA3-214ENST00000514834 IGHA2P01877 340 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 ADORA2AP29274 412 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 TTC22Q5TAA0 569 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
ITGA3-214ENST00000514834 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
ITGA3-214ENST00000514834 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 DIS3LQ8TF46 1054 aaKnown RBP16.46■□□□□ 0.23
ITGA3-214ENST00000514834 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.23
ITGA3-214ENST00000514834 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
ITGA3-214ENST00000514834 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
ITGA3-214ENST00000514834 HOXC6P09630 235 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 CYP2C19P33261 490 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 MNX1P50219 401 aaPredicted RBP16.45■□□□□ 0.22
ITGA3-214ENST00000514834 RRP12Q5JTH9 1297 aaKnown RBP16.45■□□□□ 0.22
ITGA3-214ENST00000514834 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 TRPV1Q8NER1 839 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 SLF1Q9BQI6 1058 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 DIAPH3Q9NSV4 1193 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 RIPK3Q9Y572 518 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 ZNF236Q9UL36 1845 aa16.45■□□□□ 0.22
ITGA3-214ENST00000514834 MCCP23508 829 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 STAT3P40763 770 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
ITGA3-214ENST00000514834 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 MROH8Q9H579 483 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
ITGA3-214ENST00000514834 STRNO43815 780 aa16.43■□□□□ 0.22
ITGA3-214ENST00000514834 PGK2P07205 417 aa16.43■□□□□ 0.22
ITGA3-214ENST00000514834 BMP3P12645 472 aa16.43■□□□□ 0.22
ITGA3-214ENST00000514834 NOVP48745 357 aa16.43■□□□□ 0.22
ITGA3-214ENST00000514834 LHX8Q68G74 356 aa16.43■□□□□ 0.22
ITGA3-214ENST00000514834 DPP9Q86TI2 863 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms