RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 CD2BP2O95400 341 aaKnown RBP18.54■□□□□ 0.56
TRIM41-206ENST00000514219 MAP3K9P80192 1104 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 AKAP17AQ02040 695 aaKnown RBP18.54■□□□□ 0.56
TRIM41-206ENST00000514219 EVX2Q03828 476 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 FANCBQ8NB91 859 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 NUP133Q8WUM0 1156 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 DCAF4Q8WV16 495 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 LPAR1Q92633 364 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 TRIOBPQ9H2D6 2365 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 A0A0C4DFX4 3053 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 FAM196BA6NMK8 535 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
TRIM41-206ENST00000514219 EN2P19622 333 aaPredicted RBP18.53■□□□□ 0.56
TRIM41-206ENST00000514219 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 SEPT2Q15019 361 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 RGS22Q8NE09 1264 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRIM41-206ENST00000514219 MYH4Q9Y623 1939 aa18.53■□□□□ 0.56
TRIM41-206ENST00000514219 NMT2O60551 498 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 EEF2P13639 858 aaKnown RBP18.52■□□□□ 0.56
TRIM41-206ENST00000514219 XBP1P17861 261 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 TROAPQ12815 778 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 TRAF1Q13077 416 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 SPRYD7Q5W111 196 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.56
TRIM41-206ENST00000514219 FAM184AQ8NB25 1140 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 WDR18Q9BV38 432 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 BRPF3Q9ULD4 1205 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 PTPN22Q9Y2R2 807 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 TMX2Q9Y320 296 aa18.52■□□□□ 0.56
TRIM41-206ENST00000514219 SSC5DA1L4H1 1573 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 C19orf81C9J6K1 198 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 STK3Q13188 491 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 GRM4Q14833 912 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 GMCL1Q96IK5 515 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRIM41-206ENST00000514219 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
TRIM41-206ENST00000514219 CIZ1Q9ULV3 898 aaPredicted RBP18.51■□□□□ 0.55
TRIM41-206ENST00000514219 STK36Q9NRP7 1315 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 SLC1A4P43007 532 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 SCRN1Q12765 414 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 PRKG1Q13976 671 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 LDLRAD1Q5T700 205 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 IFNL1Q8IU54 200 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 RNF26Q9BY78 433 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-206ENST00000514219 COL6A3P12111 3177 aa18.5■□□□□ 0.55
TRIM41-206ENST00000514219 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 IFNAR1P17181 557 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 INHBEP58166 350 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 ERO1BQ86YB8 467 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 CDAN1Q8IWY9 1227 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
TRIM41-206ENST00000514219 MANSC4A6NHS7 340 aaPredicted RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 hCG_1984214I3L0E3 225 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 USP2O75604 605 aaPredicted RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 PDHBP11177 359 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 PTPRAP18433 802 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 PPATQ06203 517 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 SSRP1Q08945 709 aaKnown RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 TRIM29Q14134 588 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 CCDC96Q2M329 555 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 LRRC47Q8N1G4 583 aaKnown RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 ZNF713Q8N859 430 aaPredicted RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 VCPKMTQ9H867 229 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 GPHNQ9NQX3 736 aaPredicted RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 TMOD4Q9NZQ9 345 aa18.48■□□□□ 0.55
TRIM41-206ENST00000514219 SEC63Q9UGP8 760 aaKnown RBP18.48■□□□□ 0.55
TRIM41-206ENST00000514219 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRIM41-206ENST00000514219 RAD21O60216 631 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 DEXIO95424 95 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 INPP5BP32019 993 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 GUCY1A2P33402 732 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 NUCB2P80303 420 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 VGLL4Q14135 290 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 USP17L2Q6R6M4 530 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 CD99L2Q8TCZ2 262 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 CHURC1Q8WUH1 139 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 SPZ1Q9BXG8 430 aa18.47■□□□□ 0.55
TRIM41-206ENST00000514219 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
TRIM41-206ENST00000514219 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 F5H6K3 240 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 WDR46O15213 610 aaKnown RBP18.46■□□□□ 0.55
TRIM41-206ENST00000514219 FDX1P10109 184 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 BACE1P56817 501 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 KLRC3Q07444 240 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 ZNF543Q08ER8 600 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms