RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 CCDC42Q96M95 316 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 KCND1Q9NSA2 647 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 ACTN4O43707 911 aaKnown RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 H2AFXP16104 143 aaPredicted RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 PDE4DQ08499 809 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 KRT31Q15323 416 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 TMEM266Q2M3C6 531 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 TDRD12Q587J7 1177 aaKnown RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 CC2D1AQ6P1N0 951 aaPredicted RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 BMP2KQ9NSY1 1161 aaPredicted RBP12.9□□□□□ -0.34
CTNND2-215ENST00000513588 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
CTNND2-215ENST00000513588 BICDL2A1A5D9 508 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 TMTC3Q6ZXV5 915 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 ZNF34Q8IZ26 560 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 MRFAP1Q9Y605 127 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 A0A1B0GTH6 734 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 MACROD2A1Z1Q3 448 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 H7C1D1 291 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 TRAPPC10P48553 1259 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 DNA2P51530 1060 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 NR1I3Q14994 352 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 LUC7LQ9NQ29 371 aaKnown RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 INF2Q27J81 1249 aa12.89□□□□□ -0.35
CTNND2-215ENST00000513588 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 ZCCHC17Q9NP64 241 aaKnown RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 ARPP21Q9UBL0 812 aaPredicted RBP12.89□□□□□ -0.35
CTNND2-215ENST00000513588 NMT2O60551 498 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 TRIM65Q6PJ69 517 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 NOC4LQ9BVI4 516 aaKnown RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 C6orf50Q9HD87 102 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 TUBGCP6Q96RT7 1819 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 FGFR2P21802 821 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 LONP1P36776 959 aaKnown RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 CUL4BQ13620 913 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 MYO6Q9UM54 1294 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 BMP6P22004 513 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 TSG101Q99816 390 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
CTNND2-215ENST00000513588 RWDD2AQ9UIY3 292 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 GDAQ9Y2T3 454 aa12.88□□□□□ -0.35
CTNND2-215ENST00000513588 GSTO1P78417 241 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 ERFEQ4G0M1 354 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 ZNF658Q5TYW1 1059 aaPredicted RBP12.87□□□□□ -0.35
CTNND2-215ENST00000513588 ELOA2Q8IYF1 753 aaPredicted RBP12.87□□□□□ -0.35
CTNND2-215ENST00000513588 JAKMIP2Q96AA8 810 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 RIC1Q4ADV7 1423 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 SEMA3EO15041 775 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 CCNT1O60563 726 aaKnown RBP12.87□□□□□ -0.35
CTNND2-215ENST00000513588 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
CTNND2-215ENST00000513588 GNA11P29992 359 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 TACC1O75410 805 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 PHF20Q9BVI0 1012 aa12.87□□□□□ -0.35
CTNND2-215ENST00000513588 ADD3Q9UEY8 706 aaKnown RBP12.87□□□□□ -0.35
CTNND2-215ENST00000513588 FAM237AA0A1B0GTK4 181 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 ENC1O14682 589 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
CTNND2-215ENST00000513588 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
CTNND2-215ENST00000513588 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
CTNND2-215ENST00000513588 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
CTNND2-215ENST00000513588 ZNF18P17022 549 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 TCP11X2Q5H9J9 407 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 CABP7Q86V35 215 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 FHOD1Q9Y613 1164 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 MECOMQ03112 1051 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
CTNND2-215ENST00000513588 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms