RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
RNF4-220ENST00000513578 GOLPH3LQ9H4A5 285 aa9.62□□□□□ -0.87
RNF4-220ENST00000513578 VPS54Q9P1Q0 977 aa9.62□□□□□ -0.87
RNF4-220ENST00000513578 NYAP2Q9P242 653 aa9.62□□□□□ -0.87
RNF4-220ENST00000513578 PPP1R1BQ9UD71 204 aaPredicted RBP9.62□□□□□ -0.87
RNF4-220ENST00000513578 NOL7Q9UMY1 257 aaKnown RBP9.62□□□□□ -0.87
RNF4-220ENST00000513578 HPSEQ9Y251 543 aa9.62□□□□□ -0.87
RNF4-220ENST00000513578 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 DDTLA6NHG4 134 aaPredicted RBP9.61□□□□□ -0.87
RNF4-220ENST00000513578 M0R2N6 131 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 PSMD14O00487 310 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 KINO60870 393 aaKnown RBP9.61□□□□□ -0.87
RNF4-220ENST00000513578 ZBTB7AO95365 584 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 PDHBP11177 359 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 PRELPP51888 382 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 RBM5P52756 815 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNF4-220ENST00000513578 NR5A1Q13285 461 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 RESP18Q5W5W9 173 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 FAM83AQ86UY5 434 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 ZFPM1Q8IX07 1006 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
RNF4-220ENST00000513578 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 FAM151AQ8WW52 585 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 PDLIM2Q96JY6 352 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 PANK2Q9BZ23 570 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 TAOK3Q9H2K8 898 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 DNAJC18Q9H819 358 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 KANSL2Q9H9L4 492 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 ZNF277Q9NRM2 450 aaPredicted RBP9.61□□□□□ -0.87
RNF4-220ENST00000513578 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 TMOD2Q9NZR1 351 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 HERC5Q9UII4 1024 aaKnown RBP9.61□□□□□ -0.87
RNF4-220ENST00000513578 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
RNF4-220ENST00000513578 SRPRBQ9Y5M8 271 aaKnown RBP9.61□□□□□ -0.87
RNF4-220ENST00000513578 TRIM75PA6NK02 468 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 STXBP3O00186 592 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 TBC1D12O60347 775 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 NLRP5P59047 1200 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 TYRO3Q06418 890 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 ZNF543Q08ER8 600 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 TNIP1Q15025 636 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 CERKLQ49MI3 558 aaPredicted RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 GPATCH4Q5T3I0 446 aaKnown RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 TMEM179Q6ZVK1 233 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 BLIDQ8IZY5 108 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 RRP36Q96EU6 259 aaKnown RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 ZMYND12Q9H0C1 365 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 CABP5Q9NP86 173 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 ZNF70Q9UC06 446 aaPredicted RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 FBXO2Q9UK22 296 aaPredicted RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
RNF4-220ENST00000513578 PCDHAC2Q9Y5I4 1007 aa9.6□□□□□ -0.87
RNF4-220ENST00000513578 ATAD5Q96QE3 1844 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 NFKBIEO00221 500 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 PFKFB1P16118 471 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 NDUFA8P51970 172 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 ZNF280AP59817 542 aaPredicted RBP9.59□□□□□ -0.87
RNF4-220ENST00000513578 MAP3K10Q02779 954 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 CXCL9Q07325 125 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 ORC2Q13416 577 aaPredicted RBP9.59□□□□□ -0.87
RNF4-220ENST00000513578 WWC2Q6AWC2 1192 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 CIAPIN1Q6FI81 312 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 PPP1R18Q6NYC8 613 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 SHC4Q6S5L8 630 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 SASS6Q6UVJ0 657 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 DCAF4Q8WV16 495 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 JDP2Q8WYK2 163 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 FERMT2Q96AC1 680 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 MTMR8Q96EF0 704 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 CLIP2Q9UDT6 1046 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 PCDHB6Q9Y5E3 794 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 MRVI1Q9Y6F6 885 aa9.59□□□□□ -0.87
RNF4-220ENST00000513578 SBF1O95248 1867 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 A0A1B0GVL5 298 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 hCG_1642624A0A1W2PR95 340 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 USP17L5A8MUK1 530 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 RAD17O75943 681 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 ZNF202O95125 648 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 VEGFAP15692 232 aaPredicted RBP9.58□□□□□ -0.88
RNF4-220ENST00000513578 MARCKSP29966 332 aaPredicted RBP9.58□□□□□ -0.88
RNF4-220ENST00000513578 GNA11P29992 359 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 PTGER2P43116 358 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 SYKP43405 635 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 ATP2C1P98194 919 aaPredicted RBP9.58□□□□□ -0.88
RNF4-220ENST00000513578 TCP10Q12799 353 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 CAMK4Q16566 473 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 HS1BP3Q53T59 392 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 EARS2Q5JPH6 523 aaKnown RBP9.58□□□□□ -0.88
RNF4-220ENST00000513578 TTC38Q5R3I4 469 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 ARL6IP4Q66PJ3 421 aaKnown RBP9.58□□□□□ -0.88
RNF4-220ENST00000513578 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 TEX2Q8IWB9 1127 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 GMCL1P1Q8NEA9 526 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 DPF2Q92785 391 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms