RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 Q6ZNB5 142 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 CCDC155Q8N6L0 562 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 SH3TC2Q8TF17 1288 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 XAGE3Q8WTP9 111 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 ALKBH8Q96BT7 664 aaKnown RBP6.31□□□□□ -1.4
HTT-211ENST00000513326 FAM89AQ96GI7 184 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 GMCL1Q96IK5 515 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 PTPN18Q99952 460 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
HTT-211ENST00000513326 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 SEC31BQ9NQW1 1179 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 PCDHAC2Q9Y5I4 1007 aa6.31□□□□□ -1.4
HTT-211ENST00000513326 WNT10BO00744 389 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 GPR182O15218 404 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 IGHA2P01877 340 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
HTT-211ENST00000513326 DSC3Q14574 896 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 KRT24Q2M2I5 525 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 C8orf34Q49A92 452 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 COPS6Q7L5N1 327 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 TRIM22Q8IYM9 498 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 WNK4Q96J92 1243 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 ZCCHC2Q9C0B9 1178 aaKnown RBP6.3□□□□□ -1.4
HTT-211ENST00000513326 ARHGAP39Q9C0H5 1083 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
HTT-211ENST00000513326 PCDHGC4Q9Y5F7 938 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 LAMB1P07942 1786 aa6.3□□□□□ -1.4
HTT-211ENST00000513326 ATXN7O15265 892 aaPredicted RBP6.29□□□□□ -1.4
HTT-211ENST00000513326 NEFLP07196 543 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 FAM157BP0CG42 384 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
HTT-211ENST00000513326 KLRK1P26718 216 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 SF3B3Q15393 1217 aaKnown RBP6.29□□□□□ -1.4
HTT-211ENST00000513326 FBXO33Q7Z6M2 555 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 CMTR1Q8N1G2 835 aaKnown RBP6.29□□□□□ -1.4
HTT-211ENST00000513326 AGBL3Q8NEM8 1001 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 JARID2Q92833 1246 aaPredicted RBP6.29□□□□□ -1.4
HTT-211ENST00000513326 NIF3L1Q9GZT8 377 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 EFCC1Q9HA90 598 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 OTOFQ9HC10 1997 aa6.29□□□□□ -1.4
HTT-211ENST00000513326 HTATSF1O43719 755 aaKnown RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 P4HBP07237 508 aaKnown RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 THBS1P07996 1170 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 ZNF16P17020 682 aaPredicted RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 ITGA6P23229 1130 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 FGD1P98174 961 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 LAMC2Q13753 1193 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 DBN1Q16643 649 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 SLC4A8Q2Y0W8 1093 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 SLC9C1Q4G0N8 1177 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 DACT2Q5SW24 774 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 XKR5Q6UX68 686 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 Q7L0L9 218 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 GIPC2Q8TF65 315 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 ZBED3Q96IU2 234 aaPredicted RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 EYA3Q99504 573 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 ISCA1Q9BUE6 129 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 COL25A1Q9BXS0 654 aaPredicted RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 ZC3H12CQ9C0D7 883 aaKnown RBP6.28□□□□□ -1.4
HTT-211ENST00000513326 USP20Q9Y2K6 914 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 KCNMB2Q9Y691 235 aa6.28□□□□□ -1.4
HTT-211ENST00000513326 ERBB4Q15303 1308 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 MANSC4A6NHS7 340 aaPredicted RBP6.27□□□□□ -1.41
HTT-211ENST00000513326 EFSO43281 561 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 XYLBO75191 536 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 CTGFP29279 349 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 RPS8P62241 208 aaKnown RBP6.27□□□□□ -1.41
HTT-211ENST00000513326 SP3Q02447 781 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 UBAP2LQ14157 1087 aaKnown RBP6.27□□□□□ -1.41
HTT-211ENST00000513326 TRIP4Q15650 581 aaPredicted RBP6.27□□□□□ -1.41
HTT-211ENST00000513326 ARMC9Q7Z3E5 817 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 ZNF438Q7Z4V0 828 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 UBE2Q1Q7Z7E8 422 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 TXNRD3Q86VQ6 643 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 GGA1Q9UJY5 639 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 KCNH4Q9UQ05 1017 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 UNC80Q8N2C7 3258 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 SPEF2Q9C093 1822 aa6.27□□□□□ -1.41
HTT-211ENST00000513326 E9PSI1 815 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 IRS4O14654 1257 aaPredicted RBP6.26□□□□□ -1.41
HTT-211ENST00000513326 KHNYNO15037 678 aaKnown RBP6.26□□□□□ -1.41
HTT-211ENST00000513326 GRNP28799 593 aaKnown RBP6.26□□□□□ -1.41
HTT-211ENST00000513326 PPP2R1AP30153 589 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 NF2P35240 595 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 MAPK8P45983 427 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 TNP2Q05952 138 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 HSP90AB3PQ58FF7 597 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 NBPF12Q5TAG4 269 aaPredicted RBP6.26□□□□□ -1.41
HTT-211ENST00000513326 KIAA0825Q8IV33 1275 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 FAM43AQ8N2R8 423 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 BRI3BPQ8WY22 251 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 DPF3Q92784 378 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 ZNF837Q96EG3 531 aaPredicted RBP6.26□□□□□ -1.41
HTT-211ENST00000513326 PLEKHF1Q96S99 279 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 BCL11AQ9H165 835 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms