RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ZYXQ15942 572 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 KIF2CQ99661 725 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 NKX2-4Q9H2Z4 354 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 RABGAP1Q9Y3P9 1069 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 SEPT4O43236 478 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 GDF11O95390 407 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 MRE11P49959 708 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 DPP9Q86TI2 863 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 KHSRPQ92945 711 aaKnown RBP eCLIP12.48□□□□□ -0.418e-13■■■□□ 17.4
PDLIM5-217ENST00000512274 KCNB2Q92953 911 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 SIPA1L1O43166 1804 aa12.48□□□□□ -0.41
PDLIM5-217ENST00000512274 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 ASNSP08243 561 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 HOXC6P09630 235 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 MECOMQ03112 1051 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 GRB14Q14449 540 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 BECN1Q14457 450 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 RABEP1Q15276 862 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 FAM163AQ96GL9 167 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 NEUROD6Q96NK8 337 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 BOLA2Q9H3K6 86 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 C11orf16Q9NQ32 467 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 BTBD7Q9P203 1132 aa12.47□□□□□ -0.41
PDLIM5-217ENST00000512274 ACRP10323 421 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 MCCP23508 829 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 AAK1Q2M2I8 961 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 TMEM240Q5SV17 173 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 USP17L2Q6R6M4 530 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 C16orf59Q7L2K0 433 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 HERC5Q9UII4 1024 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 MSRAQ9UJ68 235 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
PDLIM5-217ENST00000512274 SEMA3EO15041 775 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 GPR37L1O60883 481 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 PGK1P00558 417 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 HSPA4P34932 840 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 SPTY2D1Q68D10 685 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 PI16Q6UXB8 463 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 TEX11Q8IYF3 940 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 FSD1Q9BTV5 496 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 LSG1Q9H089 658 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 SLC28A3Q9HAS3 691 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 HELLSQ9NRZ9 838 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
PDLIM5-217ENST00000512274 A0A1W2PQ45 241 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 A0A1W2PQY0 241 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 DCDC2CA8MYV0 355 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 COBLO75128 1261 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 TIMP1P01033 207 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 IGHA2P01877 340 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 ADORA2AP29274 412 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 RAB30Q15771 203 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 OLFML2BQ68BL8 750 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 CCDC102BQ68D86 513 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 CRACR2BQ8N4Y2 399 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 DNAJC18Q9H819 358 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 XPNPEP3Q9NQH7 507 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 PI4KBQ9UBF8 816 aa12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 YBX2Q9Y2T7 364 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 ZNFX1Q9P2E3 1918 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-217ENST00000512274 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 CSF2RAP15509 400 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 TSGA10IPQ3SY00 556 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 ZMYM1Q5SVZ6 1142 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 GORABQ5T7V8 394 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms