RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 SPZ1Q9BXG8 430 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 ARHGEF10LQ9HCE6 1279 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 KIF3AQ9Y496 699 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 CCDC82Q8N4S0 544 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 WASF1Q92558 559 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 MTMR8Q96EF0 704 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 ALG1Q9BT22 464 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 SNCAIPQ9Y6H5 919 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 MYH6P13533 1939 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
PDGFRA-209ENST00000512143 PLA2G6O60733 806 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 ZSCAN22P10073 491 aaPredicted RBP11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 SLC1A4P43007 532 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 VGLL4Q14135 290 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 PFKFB3Q16875 520 aaPredicted RBP11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 TTBK2Q6IQ55 1244 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 BTNL9Q6UXG8 535 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 TNPO1Q92973 898 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 RBM27Q9P2N5 1060 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 FRMPD2Q68DX3 1309 aaPredicted RBP11.57□□□□□ -0.56
PDGFRA-209ENST00000512143 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 TRAF5O00463 557 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 ITGBL1O95965 494 aaPredicted RBP11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 F13A1P00488 732 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 BMP3P12645 472 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 NF2P35240 595 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 MOB2Q70IA6 237 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 GOPCQ9HD26 462 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 PICK1Q9NRD5 415 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 GJB4Q9NTQ9 266 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 AFG3L2Q9Y4W6 797 aa11.56□□□□□ -0.56
PDGFRA-209ENST00000512143 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 SCG2P13521 617 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 BACE1P56817 501 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 AKAP17AQ02040 695 aaKnown RBP11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 FMR1Q06787 632 aaKnown RBP eCLIP11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 SPP2Q13103 211 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 RESTQ13127 1097 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 PRKG1Q13976 671 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 CCDC96Q2M329 555 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 KRT40Q6A162 431 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 KCTD1Q719H9 257 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 ANKRD13AQ8IZ07 590 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 ADGRF4Q8IZF3 695 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 FAM177A1Q8N128 213 aaPredicted RBP11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 LPAR1Q92633 364 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 C12orf42Q96LP6 360 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 NUP88Q99567 741 aaPredicted RBP11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 JMJD4Q9H9V9 463 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 AS3MTQ9HBK9 375 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 SH3GLB2Q9NR46 395 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 ZHX2Q9Y6X8 837 aa11.55□□□□□ -0.56
PDGFRA-209ENST00000512143 VPS37CA5D8V6 355 aaPredicted RBP11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 SLC16A2P36021 539 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 USP14P54578 494 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 FKBP1BP68106 108 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 NPY5RQ15761 445 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 ARMC9Q7Z3E5 817 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 CLMNQ96JQ2 1002 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 PIGSQ96S52 555 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
PDGFRA-209ENST00000512143 PNMA6FA0A0J9YX94 578 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 SPDYE5A6NIY4 337 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 H3BQV1 296 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 PPP1R11O60927 126 aaPredicted RBP11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 MMP1P03956 469 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 KIF23Q02241 960 aaPredicted RBP11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 PPATQ06203 517 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 MTMR2Q13614 643 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms