RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 PRR13Q9NZ81 148 aa5.84□□□□□ -1.47
CALCOCO2-220ENST00000511816 PCDHB10Q9UN67 800 aa5.84□□□□□ -1.47
CALCOCO2-220ENST00000511816 SUGT1Q9Y2Z0 365 aa5.84□□□□□ -1.47
CALCOCO2-220ENST00000511816 FAM155AB1AL88 458 aaPredicted RBP5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 CBX7O95931 251 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 AUHQ13825 339 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 CLEC16AQ2KHT3 1053 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 TDRD10Q5VZ19 366 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 POMZP3Q6PJE2 187 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 VSIG10LQ86VR7 867 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 DTX1Q86Y01 620 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 LRRC47Q8N1G4 583 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 NETO1Q8TDF5 533 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 TRIT1Q9H3H1 467 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 LRP2BPQ9P2M1 347 aa5.83□□□□□ -1.48
CALCOCO2-220ENST00000511816 A0A087WZG4 1122 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 TLDC2A0PJX2 215 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 NOP56O00567 594 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 SUSD5O60279 629 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 LEFTY1O75610 366 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 CD247P20963 164 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 RASA3Q14644 834 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 IFI16Q16666 785 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 SV2CQ496J9 727 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 MFSD4AQ8N468 514 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 ENOX1Q8TC92 643 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 KLHL6Q8WZ60 621 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 PPP1R14AQ96A00 147 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 ZNF512BQ96KM6 892 aaPredicted RBP5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 IPO9Q96P70 1041 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 HAUS7Q99871 368 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 WHRNQ9P202 907 aa5.82□□□□□ -1.48
CALCOCO2-220ENST00000511816 C9IYK1 514 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 CEACAM5P06731 702 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 ZNF865P0CJ78 1059 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 ITIH2P19823 946 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 SPINK2P20155 84 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 HOXA10P31260 410 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 NBPF9Q3BBW0 867 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 ZC3H12BQ5HYM0 836 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 AXDND1Q5T1B0 1012 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 AGBL5Q8NDL9 886 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 FLCNQ8NFG4 579 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 MICAL1Q8TDZ2 1067 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 VWCEQ96DN2 955 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 SGSM3Q96HU1 749 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 DSCC1Q9BVC3 393 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 FAM86C1Q9NVL1 165 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 ZC3H7BQ9UGR2 993 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 SLC5A6Q9Y289 635 aa5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 DIS3Q9Y2L1 958 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 SF3B6Q9Y3B4 125 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-220ENST00000511816 TMEM265A0A087WTH1 108 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 B2RBV5 119 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 EPHX1P07099 455 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 SSRP1Q08945 709 aaKnown RBP5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 MSMPQ1L6U9 139 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 TAF7LQ5H9L4 462 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 DCAF15Q66K64 600 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 CWF19L1Q69YN2 538 aaKnown RBP5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 PPFIBP1Q86W92 1011 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 TP53INP2Q8IXH6 220 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 SHISA5Q8N114 240 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 FAM181AQ8N9Y4 354 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 HRASLS5Q96KN8 279 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 DNAJC7Q99615 494 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 PIF1Q9H611 641 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 GPATCH2Q9NW75 528 aa5.8□□□□□ -1.48
CALCOCO2-220ENST00000511816 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 PRNPP04156 253 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 CLCN7P51798 805 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 LONRF2Q1L5Z9 754 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 DTWD2Q8NBA8 298 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 LRRN4CLQ8ND94 238 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 BVESQ8NE79 360 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 RCC1LQ96I51 464 aaKnown RBP5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 HEXIM2Q96MH2 286 aaKnown RBP5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 KLHL25Q9H0H3 589 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 GP6Q9HCN6 339 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 SNX11Q9Y5W9 270 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 FHOD1Q9Y613 1164 aa5.79□□□□□ -1.48
CALCOCO2-220ENST00000511816 CCDC163A0A0D9SF12 145 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 SSU72P8A0A1W2PR75 194 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 FAM221BA6H8Z2 402 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 SIGLEC6O43699 453 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 SMARCA5O60264 1052 aaPredicted RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 ENDOUP21128 410 aaKnown RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 NOP2P46087 812 aaKnown RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 POU4F1Q01851 419 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 NMIQ13287 307 aaPredicted RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 HSP90AA2PQ14568 343 aaPredicted RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 SLC10A6Q3KNW5 377 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 GIMAP6Q6P9H5 292 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 FAM214BQ7L5A3 538 aa5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 PLD6Q8N2A8 252 aaKnown RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 SYTL5Q8TDW5 730 aaPredicted RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 THAP3Q8WTV1 239 aaPredicted RBP5.78□□□□□ -1.48
CALCOCO2-220ENST00000511816 ASB11Q8WXH4 323 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms