RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 C15orf52Q6ZUT6 534 aaKnown RBP8.42□□□□□ -1.06
COPS4-209ENST00000511653 TRIM46Q7Z4K8 759 aa8.42□□□□□ -1.06
COPS4-209ENST00000511653 ALDH16A1Q8IZ83 802 aa8.42□□□□□ -1.06
COPS4-209ENST00000511653 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
COPS4-209ENST00000511653 TSEN34Q9BSV6 310 aaKnown RBP8.42□□□□□ -1.06
COPS4-209ENST00000511653 ZNF232Q9UNY5 417 aa8.42□□□□□ -1.06
COPS4-209ENST00000511653 MANSC4A6NHS7 340 aaPredicted RBP8.41□□□□□ -1.06
COPS4-209ENST00000511653 ZBTB48P10074 688 aaPredicted RBP8.41□□□□□ -1.06
COPS4-209ENST00000511653 MARSP56192 900 aaKnown RBP8.41□□□□□ -1.06
COPS4-209ENST00000511653 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
COPS4-209ENST00000511653 IFIT5Q13325 482 aaKnown RBP8.41□□□□□ -1.06
COPS4-209ENST00000511653 TMEM214Q6NUQ4 689 aaKnown RBP8.41□□□□□ -1.06
COPS4-209ENST00000511653 LMBR1LQ6UX01 489 aa8.41□□□□□ -1.06
COPS4-209ENST00000511653 OTOP1Q7RTM1 612 aa8.41□□□□□ -1.06
COPS4-209ENST00000511653 ZNF804AQ7Z570 1209 aa8.41□□□□□ -1.06
COPS4-209ENST00000511653 RHBDD1Q8TEB9 315 aa8.41□□□□□ -1.06
COPS4-209ENST00000511653 KLK14Q9P0G3 267 aa8.41□□□□□ -1.06
COPS4-209ENST00000511653 TRIM17Q9Y577 477 aa8.41□□□□□ -1.06
COPS4-209ENST00000511653 PLIN1O60240 522 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 USP2O75604 605 aaPredicted RBP8.4□□□□□ -1.06
COPS4-209ENST00000511653 AVPP01185 164 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 NPR3P17342 541 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 PLA2G4AP47712 749 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 CRHR2Q13324 411 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 RASA3Q14644 834 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 MRPL14Q6P1L8 145 aaKnown RBP8.4□□□□□ -1.06
COPS4-209ENST00000511653 RNF217Q8TC41 542 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 CD99L2Q8TCZ2 262 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 PTPN18Q99952 460 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 PHACTR1Q9C0D0 580 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 PPP2R3BQ9Y5P8 575 aa8.4□□□□□ -1.06
COPS4-209ENST00000511653 GRM8O00222 908 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 BMP2P12643 396 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 GYG1P46976 350 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 FKBP1AP62942 108 aaKnown RBP8.4□□□□□ -1.07
COPS4-209ENST00000511653 POU4F2Q12837 409 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 GRIK5Q16478 980 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 PRICKLE2Q7Z3G6 844 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 ATCAYQ86WG3 371 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 PUS3Q9BZE2 481 aaKnown RBP8.4□□□□□ -1.07
COPS4-209ENST00000511653 ELP3Q9H9T3 547 aa8.4□□□□□ -1.07
COPS4-209ENST00000511653 AK9Q5TCS8 1911 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 FAM205AQ6ZU69 1335 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 COL6A3P12111 3177 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 MYO1BO43795 1136 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 IREB2P48200 963 aaKnown RBP8.39□□□□□ -1.07
COPS4-209ENST00000511653 RBM5P52756 815 aaKnown RBP eCLIP8.39□□□□□ -1.07
COPS4-209ENST00000511653 SUPT20HL1Q3ZLR7 823 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 MFSD14BQ5SR56 506 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 LDHAL6AQ6ZMR3 332 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 ETFBKMTQ8IXQ9 262 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 MYO19Q96H55 970 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 KAZALD1Q96I82 304 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 TEPSINQ96N21 525 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
COPS4-209ENST00000511653 TDRD3Q9H7E2 651 aaKnown RBP8.39□□□□□ -1.07
COPS4-209ENST00000511653 CNNM1Q9NRU3 951 aa8.39□□□□□ -1.07
COPS4-209ENST00000511653 ZNF70Q9UC06 446 aaPredicted RBP8.39□□□□□ -1.07
COPS4-209ENST00000511653 TTF2Q9UNY4 1162 aaKnown RBP8.39□□□□□ -1.07
COPS4-209ENST00000511653 FIGNL2A6NMB9 653 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 RHOQP17081 205 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 GPC1P35052 558 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 INHBEP58166 350 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 CCDC57Q2TAC2 916 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 ANKRD13AQ8IZ07 590 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 TDRD7Q8NHU6 1098 aaKnown RBP8.38□□□□□ -1.07
COPS4-209ENST00000511653 BRI3BPQ8WY22 251 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 SUCLG2Q96I99 432 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 FAM84BQ96KN1 310 aaPredicted RBP8.38□□□□□ -1.07
COPS4-209ENST00000511653 TMEM39BQ9GZU3 492 aa8.38□□□□□ -1.07
COPS4-209ENST00000511653 TCP10L2B9ZVM9 353 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 CACNB3P54284 484 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 ERO1AQ96HE7 468 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 STIM2Q9P246 746 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 DACH1Q9UI36 760 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 PTPN22Q9Y2R2 807 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 UNCXA6NJT0 531 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 FZD6O60353 706 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 NBPF7P0C2Y1 421 aaPredicted RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 EN2P19622 333 aaPredicted RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 MAPK1P28482 360 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 HIBADHP31937 336 aaKnown RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 CRKP46108 304 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 TAGLNQ01995 201 aaKnown RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 VGLL4Q14135 290 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 UBE4AQ14139 1066 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 SLC4A10Q6U841 1118 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 NPAS4Q8IUM7 802 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 WDR63Q8IWG1 891 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 ARMC5Q96C12 935 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 EFCC1Q9HA90 598 aa8.37□□□□□ -1.07
COPS4-209ENST00000511653 C9orf78Q9NZ63 289 aaPredicted RBP8.37□□□□□ -1.07
COPS4-209ENST00000511653 PTPRFP10586 1907 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms