RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PANK1Q8TE04 598 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDX41-211ENST00000510171 ADAMTS5Q9UNA0 930 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 PHF24Q9UPV7 400 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 DIS3Q9Y2L1 958 aaKnown RBP12.55□□□□□ -0.4
DDX41-211ENST00000510171 USP17L12C9JPN9 530 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 USP17L21D6R901 530 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 HMMRO75330 724 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 PGK1P00558 417 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 PGK2P07205 417 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
DDX41-211ENST00000510171 ADD2P35612 726 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 STAT3P40763 770 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 SLFNL1Q499Z3 407 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 RIOX2Q8IUF8 465 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 RPAP2Q8IXW5 612 aaPredicted RBP12.54□□□□□ -0.4
DDX41-211ENST00000510171 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
DDX41-211ENST00000510171 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 FBXO28Q9NVF7 368 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 PAG1Q9NWQ8 432 aa12.54□□□□□ -0.4
DDX41-211ENST00000510171 A0A0C4DFX4 3053 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 VWA5AO00534 786 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 RAD21O60216 631 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 CLTBP09497 229 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 RAG1P15918 1043 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 ATP5JP18859 108 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 COPB2P35606 906 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 ZNF792Q3KQV3 632 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 C16orf86Q6ZW13 317 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 PPP1R9AQ9ULJ8 1098 aa12.53□□□□□ -0.4
DDX41-211ENST00000510171 SMIM22K7EJ46 135 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 KIAA0355O15063 1070 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.41
DDX41-211ENST00000510171 MS4A1P11836 297 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 AKR1A1P14550 325 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
DDX41-211ENST00000510171 ITGB8P26012 769 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.41
DDX41-211ENST00000510171 TTYH1Q9H313 450 aaPredicted RBP12.52□□□□□ -0.41
DDX41-211ENST00000510171 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 FOCADQ5VW36 1801 aa12.52□□□□□ -0.41
DDX41-211ENST00000510171 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
DDX41-211ENST00000510171 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
DDX41-211ENST00000510171 EPHB4P54760 987 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 CTR9Q6PD62 1173 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 SIRT2Q8IXJ6 389 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
DDX41-211ENST00000510171 HAUS7Q99871 368 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
DDX41-211ENST00000510171 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
DDX41-211ENST00000510171 FAM184BQ9ULE4 1060 aa12.51□□□□□ -0.41
DDX41-211ENST00000510171 TMEM265A0A087WTH1 108 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 DCDC2CA8MYV0 355 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 CHGBP05060 677 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 FOSL2P15408 326 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 ACLYP53396 1101 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 FPGSQ05932 587 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 ZSCAN25Q6NSZ9 544 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 ANKRD33Q7Z3H0 272 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 REPS2Q8NFH8 660 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 DDX11Q96FC9 970 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 TOX2Q96NM4 488 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 STARD7Q9NQZ5 370 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
DDX41-211ENST00000510171 MYH1P12882 1939 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 CDK5RAP2Q96SN8 1893 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.49□□□□□ -0.41
DDX41-211ENST00000510171 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.49□□□□□ -0.41
DDX41-211ENST00000510171 MOXD2PA6NHM9 499 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 ADAMTS4O75173 837 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 KCNA10Q16322 511 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
DDX41-211ENST00000510171 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDX41-211ENST00000510171 TEX13BQ9BXU2 312 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 MKNK2Q9HBH9 465 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 DDX19BQ9UMR2 479 aa12.49□□□□□ -0.41
DDX41-211ENST00000510171 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 F5H6K3 240 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 ZBED4O75132 1171 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 KLRC3Q07444 240 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms