RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 RXRAP19793 462 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 SYT1P21579 422 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 FUT2Q10981 343 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 PKP1Q13835 747 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 RRP1BQ14684 758 aaKnown RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 ABCB5Q2M3G0 1257 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 ARSIQ5FYB1 569 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 HOOK2Q96ED9 719 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 DPYSL4O14531 572 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 KIF5BP33176 963 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 DCPSQ96C86 337 aaKnown RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
NEK1-205ENST00000510108 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
NEK1-205ENST00000510108 CNTNAP5Q8WYK1 1306 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 MYH6P13533 1939 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 MYH15Q9Y2K3 1946 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
NEK1-205ENST00000510108 GDF11O95390 407 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 PRKCSHP14314 528 aaPredicted RBP11.85□□□□□ -0.51
NEK1-205ENST00000510108 SMARCA1P28370 1054 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 CAP2P40123 477 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 GNAQP50148 359 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 JAG1P78504 1218 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 ICA1Q05084 483 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
NEK1-205ENST00000510108 DCAF15Q66K64 600 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 LDHDQ86WU2 507 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 CCDC144CPQ8IYA2 1237 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 KHSRPQ92945 711 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■□□ 17.1
NEK1-205ENST00000510108 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
NEK1-205ENST00000510108 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 TAF1DQ9H5J8 278 aaPredicted RBP11.85□□□□□ -0.51
NEK1-205ENST00000510108 CABP5Q9NP86 173 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 ORC3Q9UBD5 711 aaPredicted RBP11.85□□□□□ -0.51
NEK1-205ENST00000510108 MAD2L2Q9UI95 211 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 ZNF112Q9UJU3 913 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 ZBTB21Q9ULJ3 1066 aa11.85□□□□□ -0.51
NEK1-205ENST00000510108 OTOFQ9HC10 1997 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 POTECB2RU33 542 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 MPHOSPH10O00566 681 aaKnown RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 PRPF3O43395 683 aaKnown RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 DEXIO95424 95 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 GH2P01242 217 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 PDHBP11177 359 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 SSRP1Q08945 709 aaKnown RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 SEPT2Q15019 361 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 SIAH1Q8IUQ4 282 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 FAM184AQ8NB25 1140 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 ZNF784Q8NCA9 323 aaPredicted RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 GMCL1P1Q8NEA9 526 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
NEK1-205ENST00000510108 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
NEK1-205ENST00000510108 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
NEK1-205ENST00000510108 PLEKHA8P1O95397 391 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 F13A1P00488 732 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 ASNSP08243 561 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
NEK1-205ENST00000510108 ASPRV1Q53RT3 343 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 NBPF12Q5TAG4 269 aaPredicted RBP11.83□□□□□ -0.52
NEK1-205ENST00000510108 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 SRBD1Q8N5C6 995 aaKnown RBP11.83□□□□□ -0.52
NEK1-205ENST00000510108 WASF1Q92558 559 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 PHKBQ93100 1093 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 SPZ1Q9BXG8 430 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.52
NEK1-205ENST00000510108 POLR2AP24928 1970 aaKnown RBP11.82□□□□□ -0.52
NEK1-205ENST00000510108 PARP1P09874 1014 aaKnown RBP11.82□□□□□ -0.52
NEK1-205ENST00000510108 NF2P35240 595 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 ZNF543Q08ER8 600 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 SUPT20HL1Q3ZLR7 823 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 NOL9Q5SY16 702 aaKnown RBP11.82□□□□□ -0.52
NEK1-205ENST00000510108 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 FAM177A1Q8N128 213 aaPredicted RBP11.82□□□□□ -0.52
NEK1-205ENST00000510108 LRRC47Q8N1G4 583 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms