RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 SDR42E1Q8WUS8 393 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 TIFAQ96CG3 184 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 DDX11Q96FC9 970 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 DYNLL2Q96FJ2 89 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 DNAJC2Q99543 621 aaKnown RBP12.5□□□□□ -0.41
MBD4-208ENST00000509828 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
MBD4-208ENST00000509828 ZNF576Q9H609 170 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 VCPKMTQ9H867 229 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 ZNF532Q9HCE3 1301 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 APBB1O00213 710 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 WDR46O15213 610 aaKnown RBP12.49□□□□□ -0.41
MBD4-208ENST00000509828 CYP2D6P10635 497 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 PDE6AP16499 860 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 ITGB8P26012 769 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 COPB2P35606 906 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 EPHB4P54760 987 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 GABPAQ06546 454 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 KIAA1755Q5JYT7 1200 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 CCDC17Q96LX7 622 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 TSEN34Q9BSV6 310 aaKnown RBP12.49□□□□□ -0.41
MBD4-208ENST00000509828 SPC25Q9HBM1 224 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
MBD4-208ENST00000509828 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 TMX2Q9Y320 296 aa12.49□□□□□ -0.41
MBD4-208ENST00000509828 GOLIM4O00461 696 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 IFIT2P09913 472 aaKnown RBP12.48□□□□□ -0.41
MBD4-208ENST00000509828 AKR1B1P15121 316 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 TAL1P17542 331 aaPredicted RBP12.48□□□□□ -0.41
MBD4-208ENST00000509828 COL9A1P20849 921 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 ACLYP53396 1101 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 PPIGQ13427 754 aaKnown RBP eCLIP12.48□□□□□ -0.41
MBD4-208ENST00000509828 RIOX2Q8IUF8 465 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 CLEC10AQ8IUN9 316 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 GLT1D1Q96MS3 346 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 IL1RAPL2Q9NP60 686 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 DCP1AQ9NPI6 582 aaPredicted RBP12.48□□□□□ -0.41
MBD4-208ENST00000509828 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
MBD4-208ENST00000509828 MYH1P12882 1939 aa12.48□□□□□ -0.41
MBD4-208ENST00000509828 TIMP1P01033 207 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
MBD4-208ENST00000509828 IGFBP4P22692 258 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 EVX2Q03828 476 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 KCNA10Q16322 511 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
MBD4-208ENST00000509828 LCORLQ8N3X6 602 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 LENG1Q96BZ8 264 aaPredicted RBP12.47□□□□□ -0.41
MBD4-208ENST00000509828 TOX2Q96NM4 488 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
MBD4-208ENST00000509828 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 MROH7Q68CQ1 1323 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 VWA5AO00534 786 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 TLR3O15455 904 aaKnown RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 C6orf222P0C671 652 aaPredicted RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 CDK8P49336 464 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 ZNF792Q3KQV3 632 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 NOL8Q76FK4 1167 aaKnown RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 ANKRD33Q7Z3H0 272 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.415e-6■■■■■ 34.6
MBD4-208ENST00000509828 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 MTIF3Q9H2K0 278 aaKnown RBP12.46□□□□□ -0.41
MBD4-208ENST00000509828 ATP8A2Q9NTI2 1148 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
MBD4-208ENST00000509828 FOCADQ5VW36 1801 aa12.46□□□□□ -0.42
MBD4-208ENST00000509828 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 PRKAB2O43741 272 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 MBD4O95243 580 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 ZNF865P0CJ78 1059 aaPredicted RBP12.45□□□□□ -0.42
MBD4-208ENST00000509828 FAM83BQ5T0W9 1011 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
MBD4-208ENST00000509828 MFSD5Q6N075 450 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 SIAH1Q8IUQ4 282 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 ATXN2LQ8WWM7 1075 aaKnown RBP12.45□□□□□ -0.42
MBD4-208ENST00000509828 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.45□□□□□ -0.428e-7■■■□□ 16.1
MBD4-208ENST00000509828 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 THEGQ9P2T0 379 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 UNC80Q8N2C7 3258 aa12.45□□□□□ -0.42
MBD4-208ENST00000509828 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 CYP2D7A0A087X1C5 515 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 GRXCR1A8MXD5 290 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 USP17L21D6R901 530 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 ZBED4O75132 1171 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 ADAMTS4O75173 837 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 ACRP10323 421 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 MRPS5P82675 430 aaKnown RBP12.44□□□□□ -0.42
MBD4-208ENST00000509828 GNASQ5JWF2 1037 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms