RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 ACSS3Q9H6R3 686 aa5.91□□□□□ -1.46
CCDC30-213ENST00000509712 UPF2Q9HAU5 1272 aaKnown RBP5.91□□□□□ -1.46
CCDC30-213ENST00000509712 CHCHD3Q9NX63 227 aaKnown RBP5.91□□□□□ -1.46
CCDC30-213ENST00000509712 STRIP2Q9ULQ0 834 aa5.91□□□□□ -1.46
CCDC30-213ENST00000509712 SUGT1Q9Y2Z0 365 aa5.91□□□□□ -1.46
CCDC30-213ENST00000509712 RPGRIP1LQ68CZ1 1315 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 PRAMEF27A3QJZ7 478 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 GRK4P32298 578 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.46
CCDC30-213ENST00000509712 IRX1P78414 480 aaPredicted RBP5.9□□□□□ -1.46
CCDC30-213ENST00000509712 CCDC173Q0VFZ6 552 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 GK5Q6ZS86 529 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 C12orf50Q8NA57 414 aaPredicted RBP5.9□□□□□ -1.46
CCDC30-213ENST00000509712 RBBP8NLQ8NC74 664 aaPredicted RBP5.9□□□□□ -1.46
CCDC30-213ENST00000509712 ARMC5Q96C12 935 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 DRC1Q96MC2 740 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 FBRSQ9HAH7 460 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 OGFRQ9NZT2 677 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 CWC15Q9P013 229 aaKnown RBP5.9□□□□□ -1.46
CCDC30-213ENST00000509712 REV1Q9UBZ9 1251 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.46
CCDC30-213ENST00000509712 IL16Q14005 1332 aa5.9□□□□□ -1.47
CCDC30-213ENST00000509712 FRAT2O75474 233 aaPredicted RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 HCLS1P14317 486 aaPredicted RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 GLB1P16278 677 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 CASQ1P31415 396 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 COPB2P35606 906 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 CAP2P40123 477 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 GATA4P43694 442 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 ZSCAN26Q16670 478 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 CDPF1Q6NVV7 123 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 CCDC81Q6ZN84 652 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 FAM184AQ8NB25 1140 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 ACRBPQ8NEB7 543 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 EZH1Q92800 747 aaPredicted RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 ISL2Q96A47 359 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 ACSF2Q96CM8 615 aaPredicted RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 CFAP53Q96M91 514 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 SRRTQ9BXP5 876 aaKnown RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 SUN2Q9UH99 717 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 SMARCA5O60264 1052 aaPredicted RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 PPFIA2O75334 1257 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 HSP90AB1P08238 724 aaKnown RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 MCM4P33991 863 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 GIPRP48546 466 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 CBX1P83916 185 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 NKG7Q16617 165 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 DYMQ7RTS9 669 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 FAM169BQ8N8A8 192 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 MYRFLQ96LU7 910 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 AGAP3Q96P47 875 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 PPP1R9BQ96SB3 815 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 MAF1Q9H063 256 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 DEF6Q9H4E7 631 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 ZNF408Q9H9D4 720 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 TJP2Q9UDY2 1190 aa5.89□□□□□ -1.47
CCDC30-213ENST00000509712 R3HCC1Q9Y3T6 440 aaKnown RBP5.89□□□□□ -1.47
CCDC30-213ENST00000509712 PES1O00541 588 aaKnown RBP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 PPFIA4O75335 1185 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 PGRP06401 933 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 IMPDH2P12268 514 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 PLCG1P19174 1290 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 ASPAP45381 313 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 NAP1L1P55209 391 aaKnown RBP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 CCT2P78371 535 aaKnown RBP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 PDE4BQ07343 736 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 TRAF1Q13077 416 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 SLBPQ14493 270 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 TBC1D10BQ4KMP7 808 aaPredicted RBP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 AMOTQ4VCS5 1084 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 SGO2Q562F6 1265 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 SEZ6L2Q6UXD5 910 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 LSRQ86X29 649 aaPredicted RBP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
CCDC30-213ENST00000509712 MYRIPQ8NFW9 859 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 UBXN4Q92575 508 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 SEMA6CQ9H3T2 930 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 ANTXR1Q9H6X2 564 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 RSPH14Q9UHP6 348 aa5.88□□□□□ -1.47
CCDC30-213ENST00000509712 VDRP11473 427 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 ATP2B1P20020 1258 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
CCDC30-213ENST00000509712 RBL2Q08999 1139 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 CHAF1AQ13111 956 aaPredicted RBP5.87□□□□□ -1.47
CCDC30-213ENST00000509712 OVOS1Q6IE37 1185 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 CLEC4GQ6UXB4 293 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 MCATQ8IVS2 390 aaKnown RBP5.87□□□□□ -1.47
CCDC30-213ENST00000509712 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 DHX38Q92620 1227 aaKnown RBP5.87□□□□□ -1.47
CCDC30-213ENST00000509712 FERD3LQ96RJ6 166 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 ARPC5LQ9BPX5 153 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 IRF2BPLQ9H1B7 796 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 GRPEL1Q9HAV7 217 aa5.87□□□□□ -1.47
CCDC30-213ENST00000509712 IBTKQ9P2D0 1353 aaPredicted RBP5.86□□□□□ -1.47
CCDC30-213ENST00000509712 SLC22A31A6NKX4 558 aa5.86□□□□□ -1.47
CCDC30-213ENST00000509712 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
CCDC30-213ENST00000509712 ETFBP38117 255 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms