RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 STX8Q9UNK0 236 aa13.35□□□□□ -0.27
SIL1-212ENST00000509400 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
SIL1-212ENST00000509400 MYPNQ86TC9 1320 aa13.35□□□□□ -0.27
SIL1-212ENST00000509400 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
SIL1-212ENST00000509400 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
SIL1-212ENST00000509400 PRC1O43663 620 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 EIF5BO60841 1220 aaKnown RBP13.34□□□□□ -0.27
SIL1-212ENST00000509400 TTLL1O95922 423 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 BCRP11274 1271 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 KRT32Q14532 448 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 SEC23AQ15436 765 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 GADL1Q6ZQY3 521 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
SIL1-212ENST00000509400 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
SIL1-212ENST00000509400 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 FEZ1Q99689 392 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
SIL1-212ENST00000509400 C19orf81C9J6K1 198 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 CYP2C8P10632 490 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 MCM5P33992 734 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 RASGRP2Q7LDG7 609 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 SPICE1Q8N0Z3 855 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 TTC14Q96N46 770 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 KIF2CQ99661 725 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 MTMR7Q9Y216 660 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 TNKSO95271 1327 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
SIL1-212ENST00000509400 EYSQ5T1H1 3165 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 F5H6K3 240 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 RAD21O60216 631 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
SIL1-212ENST00000509400 KLRC3Q07444 240 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
SIL1-212ENST00000509400 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
SIL1-212ENST00000509400 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
SIL1-212ENST00000509400 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 DOCK3Q8IZD9 2030 aa13.32□□□□□ -0.28
SIL1-212ENST00000509400 SH2B2O14492 632 aaPredicted RBP13.31□□□□□ -0.28
SIL1-212ENST00000509400 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
SIL1-212ENST00000509400 NDUFB10O96000 172 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 TOP1P11387 765 aaKnown RBP13.31□□□□□ -0.28
SIL1-212ENST00000509400 ELNP15502 786 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 PSMA5P28066 241 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 HOXD10P28358 340 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 NT5C2P49902 561 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 USP14P54578 494 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 ANAPC15P60006 121 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
SIL1-212ENST00000509400 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 C12orf42Q96LP6 360 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 LARP6Q9BRS8 491 aaKnown RBP13.31□□□□□ -0.28
SIL1-212ENST00000509400 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
SIL1-212ENST00000509400 BIN2Q9UBW5 565 aaPredicted RBP13.31□□□□□ -0.28
SIL1-212ENST00000509400 DLL1O00548 723 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 SGPL1O95470 568 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 VCAM1P19320 739 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
SIL1-212ENST00000509400 WTAPQ15007 396 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 IFIT1BQ5T764 474 aaKnown RBP13.3□□□□□ -0.28
SIL1-212ENST00000509400 Q6ZUG5 572 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
SIL1-212ENST00000509400 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 HTATIP2Q9BUP3 242 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 TM6SF1Q9BZW5 370 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
SIL1-212ENST00000509400 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 PTPRFP10586 1907 aa13.3□□□□□ -0.28
SIL1-212ENST00000509400 PHIPQ8WWQ0 1821 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 VCANP13611 3396 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
SIL1-212ENST00000509400 FCGRTP55899 365 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 UBXN2AP68543 259 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 TTBK2Q6IQ55 1244 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
SIL1-212ENST00000509400 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms