RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 FAM81AQ8TBF8 368 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 SEC16BQ96JE7 1060 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ATP6V1G3Q96LB4 118 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CTAGE1Q96RT6 745 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 EPAS1Q99814 870 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ZFATQ9P243 1243 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 TRIM10Q9UDY6 481 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 LEMD3Q9Y2U8 911 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 LRRC37A3O60309 1634 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 COL15A1P39059 1388 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ZNF233A6NK53 670 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CYP21A2P08686 494 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ERCC5P28715 1186 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 RANBP1P43487 201 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ITGB3BPQ13352 177 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 MORC3Q14149 939 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CFAP58Q5T655 872 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 SLC9C2Q5TAH2 1124 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 NT5DC1Q5TFE4 455 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 OTUD7BQ6GQQ9 843 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 APLFQ8IW19 511 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 IQCKQ8N0W5 287 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 GALNT15Q8N3T1 639 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 TRIML1Q8N9V2 468 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ANKRD24Q8TF21 1146 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CCT6BQ92526 530 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 MED15Q96RN5 788 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 MMTAG2Q9BU76 263 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CDK19Q9BWU1 502 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 TSGA10Q9BZW7 698 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 PPANQ9NQ55 473 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ANAPC4Q9UJX5 808 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 REXO2Q9Y3B8 237 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 MAP3K15Q6ZN16 1313 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 B4DLN1 442 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 ATP4AP20648 1035 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 PDIA3P30101 505 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 BYSLQ13895 437 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 ZNF662Q6ZS27 426 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 SDCCAG8Q86SQ7 713 aaPredicted RBP11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 RNF8O76064 485 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 NDUFA10O95299 355 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 GSTA1P08263 222 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 EXOSC10Q01780 885 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 TRIM14Q14142 442 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 PPP1R7Q15435 360 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 STOX1Q6ZVD7 989 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 PLEKHG4BQ96PX9 1271 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 LRRC1Q9BTT6 524 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 DMGDHQ9UI17 866 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 KCNH3Q9ULD8 1083 aa11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 EPN1Q9Y6I3 576 aaPredicted RBP11.17□□□□□ -0.62
PDGFRA-207ENST00000509092 METP08581 1390 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 SEMA3EO15041 775 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 ZNF185O15231 689 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 CDC25CP30307 473 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 ABCD1P33897 745 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 SARSP49591 514 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 POSTNQ15063 836 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 TEX9Q8N6V9 391 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC63Q8NA47 563 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 HDAC7Q8WUI4 952 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 GORASP1Q9BQQ3 440 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 NDST4Q9H3R1 872 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 STIM2Q9P246 746 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 LMTK3Q96Q04 1460 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 MYH7P12883 1935 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 CFAP73A6NFT4 308 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 ZSCAN9O15535 394 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 SMIM24O75264 130 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 ALADP13716 330 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 HSPA2P54652 639 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 QPCTQ16769 361 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC122Q5T0U0 273 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 SPATA1Q5VX52 437 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 MREGQ8N565 214 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 TBC1D5Q92609 795 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 L3MBTL1Q9Y468 752 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
PDGFRA-207ENST00000509092 MYH13Q9UKX3 1938 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 PDLIM1O00151 329 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 STXBP3O00186 592 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 FOXN1O15353 648 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms