RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
RFC1-211ENST00000509084 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 LPAR1Q92633 364 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
RFC1-211ENST00000509084 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
RFC1-211ENST00000509084 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
RFC1-211ENST00000509084 CTDNEP1O95476 244 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 SLC1A4P43007 532 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 SSRP1Q08945 709 aaKnown RBP12.05□□□□□ -0.48
RFC1-211ENST00000509084 ZNF543Q08ER8 600 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 PRKG1Q13976 671 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 VGLL4Q14135 290 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 NTRK3Q16288 839 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 CCDC96Q2M329 555 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.05□□□□□ -0.48
RFC1-211ENST00000509084 SIAH1Q8IUQ4 282 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 C2orf69Q8N8R5 385 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 ZNF280CQ8ND82 737 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
RFC1-211ENST00000509084 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
RFC1-211ENST00000509084 SPZ1Q9BXG8 430 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
RFC1-211ENST00000509084 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 CNTNAP5Q8WYK1 1306 aa12.05□□□□□ -0.48
RFC1-211ENST00000509084 A0A1W2PRG0 241 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 TRAF5O00463 557 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
RFC1-211ENST00000509084 JAK2O60674 1132 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 DEXIO95424 95 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 NDUFB10O96000 172 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 ECE1P42892 770 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 NUCB2P80303 420 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 PPATQ06203 517 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 ERO1BQ86YB8 467 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 ACER1Q8TDN7 264 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 GBA2Q9HCG7 927 aaPredicted RBP12.04□□□□□ -0.48
RFC1-211ENST00000509084 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
RFC1-211ENST00000509084 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 SPDYE5A6NIY4 337 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
RFC1-211ENST00000509084 RAD21O60216 631 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
RFC1-211ENST00000509084 PLEKHA8P1O95397 391 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 BMP3P12645 472 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 XBP1P17861 261 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 DDIT3P35638 169 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 BACE1P56817 501 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 LDLRAD1Q5T700 205 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 DLK2Q6UY11 383 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 NBPF11Q86T75 865 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 FAM160B2Q86V87 743 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
RFC1-211ENST00000509084 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
RFC1-211ENST00000509084 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
RFC1-211ENST00000509084 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 KIF3CO14782 793 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 PLA2G6O60733 806 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 ITGBL1O95965 494 aaPredicted RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 FUT2Q10981 343 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 SPP2Q13103 211 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 MTMR2Q13614 643 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 TRIM29Q14134 588 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 SRBD1Q8N5C6 995 aaKnown RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 CHURC1Q8WUH1 139 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 PHKBQ93100 1093 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 RRP36Q96EU6 259 aaKnown RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 ELP3Q9H9T3 547 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 TMOD4Q9NZQ9 345 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 AFG3L2Q9Y4W6 797 aa12.02□□□□□ -0.49
RFC1-211ENST00000509084 FRMPD2Q68DX3 1309 aaPredicted RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 WDR33Q9C0J8 1336 aaKnown RBP12.02□□□□□ -0.49
RFC1-211ENST00000509084 H3BQV1 296 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 CXCL11O14625 94 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 TOMM70O94826 608 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 GOLGA8HP0CJ92 632 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 FDPSP14324 419 aaKnown RBP12.01□□□□□ -0.49
RFC1-211ENST00000509084 SYT1P21579 422 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 STAT2P52630 851 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 TRAF1Q13077 416 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms