RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 EHD4Q9H223 541 aa16.07■□□□□ 0.16
TRIM41-204ENST00000508930 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
TRIM41-204ENST00000508930 PATL2C9JE40 543 aaKnown RBP16.06■□□□□ 0.16
TRIM41-204ENST00000508930 CCNI2Q6ZMN8 369 aaPredicted RBP16.06■□□□□ 0.16
TRIM41-204ENST00000508930 TMTC2Q8N394 836 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 STRBPQ96SI9 672 aaKnown RBP16.06■□□□□ 0.16
TRIM41-204ENST00000508930 RMND1Q9NWS8 449 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 CAPN7Q9Y6W3 813 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 PSMD14O00487 310 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 CYP27B1O15528 508 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 GPTP24298 496 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 RWDD2AQ9UIY3 292 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 TARSL2A2RTX5 802 aaKnown RBP16.06■□□□□ 0.16
TRIM41-204ENST00000508930 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
TRIM41-204ENST00000508930 PSMB7Q99436 277 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
TRIM41-204ENST00000508930 RGPD2P0DJD1 1756 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 PARP1P09874 1014 aaKnown RBP16.05■□□□□ 0.16
TRIM41-204ENST00000508930 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
TRIM41-204ENST00000508930 RNF187Q5TA31 235 aaPredicted RBP16.05■□□□□ 0.16
TRIM41-204ENST00000508930 FAM184BQ9ULE4 1060 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 V9GY48 417 aaPredicted RBP16.05■□□□□ 0.16
TRIM41-204ENST00000508930 PHKA1P46020 1223 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 NFAT5O94916 1531 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 ANKRD18BA2A2Z9 1011 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 RDXP35241 583 aaKnown RBP16.05■□□□□ 0.16
TRIM41-204ENST00000508930 MAP2K2P36507 400 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 PTGDRQ13258 359 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 GDAQ9Y2T3 454 aa16.05■□□□□ 0.16
TRIM41-204ENST00000508930 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
TRIM41-204ENST00000508930 MYBL2P10244 700 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 MCM7P33993 719 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 FBXO3Q9UK99 471 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 TACC1O75410 805 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 ATP1A2P50993 1020 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 CYP27A1Q02318 531 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
TRIM41-204ENST00000508930 CENPHQ9H3R5 247 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
TRIM41-204ENST00000508930 REXO2Q9Y3B8 237 aaKnown RBP16.04■□□□□ 0.16
TRIM41-204ENST00000508930 GOLGA8KD6RF30 607 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 PRKAB2O43741 272 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
TRIM41-204ENST00000508930 ITGA6P23229 1130 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 GBP6Q6ZN66 633 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 AMOTL1Q8IY63 956 aa16.04■□□□□ 0.16
TRIM41-204ENST00000508930 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
TRIM41-204ENST00000508930 UQCRFS1P1P0C7P4 283 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 IBSPP21815 317 aaPredicted RBP16.03■□□□□ 0.16
TRIM41-204ENST00000508930 STAT6P42226 847 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 PAFAH1B1P43034 410 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 B4GALNT4Q76KP1 1039 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 TRIM49BA6NDI0 452 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 H7C1D1 291 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 CPP00450 1065 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 HNRNPH1P31943 449 aaKnown RBP16.03■□□□□ 0.16
TRIM41-204ENST00000508930 SLC7A5Q01650 507 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 CCDC42Q96M95 316 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 RPN1P04843 607 aaKnown RBP16.03■□□□□ 0.16
TRIM41-204ENST00000508930 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
TRIM41-204ENST00000508930 NLRP5P59047 1200 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 TBC1D8BQ0IIM8 1120 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 PDCLQ13371 301 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 MIGA1Q8NAN2 632 aa16.03■□□□□ 0.16
TRIM41-204ENST00000508930 WDR17Q8IZU2 1322 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 HERVK_113P62684 666 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 TCIRG1Q13488 830 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 KCTD16Q68DU8 428 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 GPIHBP1Q8IV16 184 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 EIF3HO15372 352 aaKnown RBP eCLIP16.02■□□□□ 0.166e-8■■■■■ 30.5
TRIM41-204ENST00000508930 FECHP22830 423 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 DNA2P51530 1060 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 PPARAQ07869 468 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 ZNF658Q5TYW1 1059 aaPredicted RBP16.02■□□□□ 0.16
TRIM41-204ENST00000508930 PAPD7Q5XG87 772 aaKnown RBP16.02■□□□□ 0.16
TRIM41-204ENST00000508930 SH3RF1Q7Z6J0 888 aa16.02■□□□□ 0.16
TRIM41-204ENST00000508930 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.16
TRIM41-204ENST00000508930 EPB41L4AQ9HCS5 686 aaPredicted RBP16.02■□□□□ 0.16
TRIM41-204ENST00000508930 CATIPQ7Z7H3 387 aa16.02■□□□□ 0.15
TRIM41-204ENST00000508930 CEP89Q96ST8 783 aa16.02■□□□□ 0.15
TRIM41-204ENST00000508930 PSMA7O14818 248 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 PRCPP42785 496 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 PIK3AP1Q6ZUJ8 805 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 MICALCLQ6ZW33 695 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 LACRTQ9GZZ8 138 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM41-204ENST00000508930 AFDNP55196 1824 aaKnown RBP16.01■□□□□ 0.15
TRIM41-204ENST00000508930 B4DLN1 442 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 PDE2AO00408 941 aaPredicted RBP16.01■□□□□ 0.15
TRIM41-204ENST00000508930 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 PLIN2Q99541 437 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 RNF26Q9BY78 433 aaPredicted RBP16.01■□□□□ 0.15
TRIM41-204ENST00000508930 LRP2BPQ9P2M1 347 aa16.01■□□□□ 0.15
TRIM41-204ENST00000508930 XDHP47989 1333 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms