RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 KDRP35968 1356 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 USP19O94966 1318 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 FSBPO95073 299 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 KIF20AO95235 890 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 TPM1P09493 284 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ESRRAP11474 423 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 PIK3CAP42336 1068 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CEBPAP49715 358 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 MTHFSP49914 203 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ARF3P61204 181 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ARF1P84077 181 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 KRT17Q04695 432 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 PRKG1Q13976 671 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 KIAA0753Q2KHM9 967 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 DUSP27Q5VZP5 1158 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CATIPQ7Z7H3 387 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 FBXO22Q8NEZ5 403 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 TTC17Q96AE7 1141 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 YME1L1Q96TA2 773 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 TTC1Q99614 292 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 APOL5Q9BWW9 433 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 TSPY26PQ9H489 355 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 C9orf78Q9NZ63 289 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 INVSQ9Y283 1065 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 LRP6O75581 1613 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 EXOC5O00471 708 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ERC2O15083 957 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 BLVRAP53004 296 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 IMMTQ16891 758 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC152Q4G0S7 254 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 KDELC2Q7Z4H8 507 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 IQCDQ96DY2 449 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 SEC62Q99442 399 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 PFDN4Q9NQP4 134 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 BABAM1Q9NWV8 329 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 IL13P35225 146 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 TRIM32Q13049 653 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 TTC31Q49AM3 519 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 USPL1Q5W0Q7 1092 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 NUDT18Q6ZVK8 323 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 TMC4Q7Z404 712 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MIER2Q8N344 545 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MPNDQ8N594 471 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 ARMC2Q8NEN0 867 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 TIFAQ96CG3 184 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 CHAMP1Q96JM3 812 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 KBTBD4Q9NVX7 518 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 SHANK3Q9BYB0 1731 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MAPK8IP3Q9UPT6 1336 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PAMP19021 973 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 VAMP1P23763 118 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MASP1P48740 699 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 POLGP54098 1239 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 EXOSC10Q01780 885 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PPP2R3AQ06190 1150 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 TBCELQ5QJ74 424 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PERM1Q5SV97 790 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PDCL2Q8N4E4 241 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 ENOX1Q8TC92 643 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 HOOK2Q96ED9 719 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PAWRQ96IZ0 340 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PNMA5Q96PV4 448 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 DDX23Q9BUQ8 820 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 BRINP2Q9C0B6 783 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MRC1P22897 1456 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PHF20L1A8MW92 1017 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 KCNA2P16389 499 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 HDAC2Q92769 488 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC138Q96M89 665 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 GBP4Q96PP9 640 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MAN1C1Q9NR34 630 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 EIF2B3Q9NR50 452 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 RRP15Q9Y3B9 282 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PXDNLA1KZ92 1463 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 UBR2Q8IWV8 1755 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 NWD2Q9ULI1 1742 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 CTNND1O60716 968 aaKnown RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 GAS7O60861 476 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 LILRB3O75022 631 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 HNRNPCP07910 306 aaKnown RBP eCLIP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MYCLP12524 364 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 FXR2P51116 673 aaKnown RBP eCLIP4.42□□□□□ -1.7
NEDD4-209ENST00000508871 FCGRTP55899 365 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC96Q2M329 555 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 ARMC9Q7Z3E5 817 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 MCF2L2Q86YR7 1114 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 JAMLQ86YT9 394 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PPM1NQ8N819 430 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.42□□□□□ -1.74e-6■■□□□ 13.6
NEDD4-209ENST00000508871 ZCWPW1Q9H0M4 648 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 STRIP2Q9ULQ0 834 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 PLAAQ9Y263 795 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 SIK3Q9Y2K2 1263 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 TNS3Q68CZ2 1445 aa4.42□□□□□ -1.7
NEDD4-209ENST00000508871 STAM2O75886 525 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RBP3P10745 1247 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ZKSCAN1P17029 563 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 KIF22Q14807 665 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 STARD3Q14849 445 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms