RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 INCENPQ9NQS7 918 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 TRIM17Q9Y577 477 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 A0A0G2JMZ2 1700 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 NDUFB10O96000 172 aa12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 COPB2P35606 906 aa12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 HAND2P61296 217 aa12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 TRDNQ13061 729 aa12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 COA7Q96BR5 231 aa12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
POLR2J3-213ENST00000508848 KIAA0100Q14667 2235 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 SLC25A27O95847 323 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 CTGFP29279 349 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 OAZ1P54368 228 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 CAP1Q01518 475 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 ATP2B2Q01814 1243 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 ZYXQ15942 572 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 Q3C1V9 767 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 SLFN13Q68D06 897 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 BTNL9Q6UXG8 535 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 FAM160B2Q86V87 743 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 CLEC10AQ8IUN9 316 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 ABRAQ8N0Z2 381 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 DCAF4Q8WV16 495 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 ARMC5Q96C12 935 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 ABHD8Q96I13 439 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 MROH8Q9H579 483 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 STX8Q9UNK0 236 aa12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 COL11A1P12107 1806 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-213ENST00000508848 VWA5AO00534 786 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 CNMDO75829 334 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 FLOT1O75955 427 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 BMP3P12645 472 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 TMTC2Q8N394 836 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 SOCS4Q8WXH5 440 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 USP6NLQ92738 828 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 KCNB2Q92953 911 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 TMEM47Q9BQJ4 181 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 MAF1Q9H063 256 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
POLR2J3-213ENST00000508848 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 B4E1Z4 1266 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 E7EWF7 191 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 TNPO2O14787 897 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 KDM4AO75164 1064 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 REC8O95072 547 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 HOXC6P09630 235 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 STAT2P52630 851 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 RRP12Q5JTH9 1297 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 FAM83BQ5T0W9 1011 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 GPATCH4Q5T3I0 446 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 SPICE1Q8N0Z3 855 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 SLF1Q9BQI6 1058 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 SPATC1LQ9H0A9 340 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 SLC38A10Q9HBR0 1119 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
POLR2J3-213ENST00000508848 NEDD4P46934 1319 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 WDR19Q8NEZ3 1342 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 SLC15A5A6NIM6 579 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 NMT2O60551 498 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 SLC1A4P43007 532 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 SEC23AQ15436 765 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 MORN1Q5T089 497 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 PLEKHH3Q7Z736 793 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 ENAHQ8N8S7 591 aaPredicted RBP12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 SLAIN1Q8ND83 568 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 MAP3K14Q99558 947 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 ZNF236Q9UL36 1845 aa12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 RBBP6Q7Z6E9 1792 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-213ENST00000508848 ZSWIM8A7E2V4 1837 aa12.44□□□□□ -0.42
POLR2J3-213ENST00000508848 SLC27A2O14975 620 aa12.44□□□□□ -0.42
POLR2J3-213ENST00000508848 ZBED4O75132 1171 aa12.44□□□□□ -0.42
POLR2J3-213ENST00000508848 IGHA2P01877 340 aa12.44□□□□□ -0.42
POLR2J3-213ENST00000508848 PDHBP11177 359 aa12.44□□□□□ -0.42
POLR2J3-213ENST00000508848 PTPREP23469 700 aa12.44□□□□□ -0.42
POLR2J3-213ENST00000508848 MCCP23508 829 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms