RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 HSP90AB3PQ58FF7 597 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 ADAMTSL4Q6UY14 1074 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 NIM1KQ8IY84 436 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 IL22RA1Q8N6P7 574 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 SUPT20HQ8NEM7 779 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 IL17REQ8NFR9 667 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 POP1Q99575 1024 aaKnown RBP4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 TSPYL4Q9UJ04 414 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 HACL1Q9UJ83 578 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 ABT1Q9ULW3 272 aaKnown RBP4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 LAS1LQ9Y4W2 734 aaKnown RBP4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 SCN11AQ9UI33 1791 aa4.86□□□□□ -1.63
HMGN1P11-201ENST00000508668 NFKBIEO00221 500 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 GNB5O14775 395 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 TCERG1O14776 1098 aaKnown RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 SRGNP10124 158 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 NID1P14543 1247 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 EIF2S2P20042 333 aaKnown RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 CDC25BP30305 580 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 GRM1Q13255 1194 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 ALG1LQ6GMV1 187 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 LINC00114Q6XXX2 140 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 LDHDQ86WU2 507 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 WFDC8Q8IUA0 241 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 BEND7Q8N7W2 519 aaPredicted RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 TMEM102Q8N9M5 508 aaPredicted RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 TTC9Q92623 222 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 TRIM11Q96F44 468 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 SCARF2Q96GP6 870 aaPredicted RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 BCL2L13Q9BXK5 485 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 LIN7BQ9HAP6 207 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 PRDM6Q9NQX0 595 aa4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 SH2B1Q9NRF2 756 aaPredicted RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 COL5A3P25940 1745 aaPredicted RBP4.85□□□□□ -1.63
HMGN1P11-201ENST00000508668 TNRC6CQ9HCJ0 1690 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 METTL12A8MUP2 240 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 ERVV-1B6SEH8 477 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 PIK3R2O00459 728 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 DDNO94850 711 aaPredicted RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 CAMTA2O94983 1202 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 PTPRAP18433 802 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 GPTP24298 496 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 CDC27P30260 824 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 IARSP41252 1262 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 ECE1P42892 770 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 PIP4K2AP48426 406 aaPredicted RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 RIPK4P57078 832 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 TAGLNQ01995 201 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 AIMP1Q12904 312 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 COL9A3Q14050 684 aaPredicted RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 DCTN1Q14203 1278 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 GRM2Q14416 872 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 COL19A1Q14993 1142 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 TNIP1Q15025 636 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 RALBP1Q15311 655 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 NFE2L2Q16236 605 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 PARP10Q53GL7 1025 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 KIAA0319Q5VV43 1072 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 TXNDC11Q6PKC3 985 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 DDX46Q7L014 1031 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 FBXO33Q7Z6M2 555 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 DMRTC2Q8IXT2 367 aaPredicted RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 GPC2Q8N158 579 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 SYNE4Q8N205 404 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 FBF1Q8TES7 1133 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 GIPC2Q8TF65 315 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 NXPE3Q969Y0 559 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 PHACTR3Q96KR7 559 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 DUSP9Q99956 384 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 UTP14AQ9BVJ6 771 aaKnown RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 PLVAPQ9BX97 442 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 SUV39H2Q9H5I1 410 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 ZNF277Q9NRM2 450 aaPredicted RBP4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 MIS18AQ9NYP9 233 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 USP16Q9Y5T5 823 aa4.84□□□□□ -1.63
HMGN1P11-201ENST00000508668 MRC1P22897 1456 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 LTBP3Q9NS15 1303 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 PPIP5K2O43314 1243 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 PRPF40AO75400 957 aaKnown RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 HSPA1AP0DMV8 641 aaKnown RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 HSPA1BP0DMV9 641 aaKnown RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 EPHA1P21709 976 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 EPHX2P34913 555 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 GRIA4P48058 902 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 HTRA3P83110 453 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 FGD1P98174 961 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 MAP2K1Q02750 393 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 SPRED3Q2MJR0 410 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 XP32Q5T750 250 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 NXPE4Q6UWF7 544 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 DPP8Q6V1X1 898 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 CCNJLQ8IV13 435 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 FOXD4L4Q8WXT5 416 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 TCF12Q99081 682 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 BCO2Q9BYV7 579 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 BHLHE41Q9C0J9 482 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 RNF19AQ9NV58 838 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 TRMT112Q9UI30 125 aaKnown RBP4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 PPME1Q9Y570 386 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms