RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IL17RBQ9NRM6 502 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 FEM1BQ9UK73 627 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
NUP54-207ENST00000508583 RABGAP1Q9Y3P9 1069 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
NUP54-207ENST00000508583 GTF3C3Q9Y5Q9 886 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 ADGRA2Q96PE1 1338 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 BCRP11274 1271 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 BMP3P12645 472 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 PSMA5P28066 241 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 COPB2P35606 906 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 STAT2P52630 851 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 FCGRTP55899 365 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 LACTBP83111 547 aaPredicted RBP10.72□□□□□ -0.69
NUP54-207ENST00000508583 IKQ13123 557 aaPredicted RBP10.72□□□□□ -0.69
NUP54-207ENST00000508583 TSGA10IPQ3SY00 556 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 COL13A1Q5TAT6 717 aaPredicted RBP10.72□□□□□ -0.69
NUP54-207ENST00000508583 FAM160B2Q86V87 743 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 TMTC2Q8N394 836 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 GPRC5AQ8NFJ5 357 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 CHURC1Q8WUH1 139 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 ANKS1AQ92625 1134 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 TMEM87BQ96K49 555 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 SLF1Q9BQI6 1058 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 CPA4Q9UI42 421 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 TNKSO95271 1327 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
NUP54-207ENST00000508583 IFIT3O14879 490 aaKnown RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 NMT2O60551 498 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 PLA2G6O60733 806 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 HSPA4P34932 840 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 PRMT2P55345 433 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 WTAPQ15007 396 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 CCDC96Q2M329 555 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 FAM83BQ5T0W9 1011 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 GPATCH4Q5T3I0 446 aaKnown RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 CTU1Q7Z7A3 348 aaKnown RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 PNMA1Q8ND90 353 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 P2RX7Q99572 595 aaKnown RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 CWC22Q9HCG8 908 aaKnown RBP10.71□□□□□ -0.69
NUP54-207ENST00000508583 MORF4L1Q9UBU8 362 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 CASP8AP2Q9UKL3 1982 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 PPP1R9AQ9ULJ8 1098 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 TACC3Q9Y6A5 838 aa10.71□□□□□ -0.69
NUP54-207ENST00000508583 SPDYE16A6NNV3 312 aaPredicted RBP10.7□□□□□ -0.7
NUP54-207ENST00000508583 MAPK4P31152 587 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 ERVK-24P63145 666 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 FGD1P98174 961 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
NUP54-207ENST00000508583 CATIPQ7Z7H3 387 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 MB21D2Q8IYB1 491 aaPredicted RBP10.7□□□□□ -0.7
NUP54-207ENST00000508583 COA7Q96BR5 231 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 PAGR1Q9BTK6 254 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 EFCC1Q9HA90 598 aa10.7□□□□□ -0.7
NUP54-207ENST00000508583 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
NUP54-207ENST00000508583 PRC1O43663 620 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 ZBED4O75132 1171 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
NUP54-207ENST00000508583 SLC25A27O95847 323 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 PDHBP11177 359 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 PSMC4P43686 418 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 OAZ1P54368 228 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 ANAPC15P60006 121 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 ASPRV1Q53RT3 343 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 KIAA1755Q5JYT7 1200 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 SYNE3Q6ZMZ3 975 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 STOX1Q6ZVD7 989 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 CYB5R4Q7L1T6 521 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 DHX32Q7L7V1 743 aaKnown RBP10.69□□□□□ -0.7
NUP54-207ENST00000508583 CD99L2Q8TCZ2 262 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 SOCS4Q8WXH5 440 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 KCNB2Q92953 911 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
NUP54-207ENST00000508583 TRIM17Q9Y577 477 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 IVNS1ABPQ9Y6Y0 642 aa10.69□□□□□ -0.7
NUP54-207ENST00000508583 CCDC69A6NI79 296 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 TMEM232C9JQI7 657 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 VWA5AO00534 786 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 DDAH1O94760 285 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 PARP1P09874 1014 aaKnown RBP10.68□□□□□ -0.7
NUP54-207ENST00000508583 CALM1P0DP23 149 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 CALM2P0DP24 149 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 CALM3P0DP25 149 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 SNHG28P0DPA3 235 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 KIF5BP33176 963 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 LIFRP42702 1097 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 SEC23AQ15436 765 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms