RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 TMX3Q96JJ7 454 aa24.29■■□□□ 1.48
HOXC9-203ENST00000508190 C12orf42Q96LP6 360 aa24.29■■□□□ 1.48
HOXC9-203ENST00000508190 SLKQ9H2G2 1235 aaPredicted RBP24.29■■□□□ 1.48
HOXC9-203ENST00000508190 ISY1Q9ULR0 285 aaKnown RBP24.29■■□□□ 1.48
HOXC9-203ENST00000508190 COL11A1P12107 1806 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-203ENST00000508190 FAM155AB1AL88 458 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-203ENST00000508190 PFKFB2O60825 505 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 CDC27P30260 824 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 HTRA3P83110 453 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 SCRN1Q12765 414 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 RTN1Q16799 776 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 GADL1Q6ZQY3 521 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 PAXIP1Q6ZW49 1069 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-203ENST00000508190 HSCBQ8IWL3 235 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 FANCBQ8NB91 859 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 HHIPL1Q96JK4 782 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 ZSCAN31Q96LW9 406 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-203ENST00000508190 TMOD4Q9NZQ9 345 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 MAD2L2Q9UI95 211 aa24.28■■□□□ 1.48
HOXC9-203ENST00000508190 PARP1P09874 1014 aaKnown RBP24.27■■□□□ 1.48
HOXC9-203ENST00000508190 RCAN1P53805 252 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 ZNF543Q08ER8 600 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 SNAPC2Q13487 334 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 MOGSQ13724 837 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 CYP4F22Q6NT55 531 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 CTCFLQ8NI51 663 aaPredicted RBP24.27■■□□□ 1.48
HOXC9-203ENST00000508190 LPAR1Q92633 364 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 MS4A4AQ96JQ5 239 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 GPCPD1Q9NPB8 672 aa24.27■■□□□ 1.48
HOXC9-203ENST00000508190 FAM217BQ9NTX9 383 aaPredicted RBP24.27■■□□□ 1.48
HOXC9-203ENST00000508190 K7ELQ4 463 aaPredicted RBP24.26■■□□□ 1.47
HOXC9-203ENST00000508190 BMP3P12645 472 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 GRM1Q13255 1194 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 TREML2Q5T2D2 321 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 TTBK2Q6IQ55 1244 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 GTF3C6Q969F1 213 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 MAP3K14Q99558 947 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 CPVLQ9H3G5 476 aa24.26■■□□□ 1.47
HOXC9-203ENST00000508190 PALM3A6NDB9 673 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-203ENST00000508190 RASSF10A6NK89 507 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 WDR46O15213 610 aaKnown RBP24.25■■□□□ 1.47
HOXC9-203ENST00000508190 DTNBO60941 627 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 PLEKHA8P1O95397 391 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 ADD1P35611 737 aaKnown RBP24.25■■□□□ 1.47
HOXC9-203ENST00000508190 GTF2A2P52657 109 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 CCDC83Q8IWF9 413 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 CMTR1Q8N1G2 835 aaKnown RBP24.25■■□□□ 1.47
HOXC9-203ENST00000508190 SH2B1Q9NRF2 756 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-203ENST00000508190 DEFB115Q30KQ5 88 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 ASPRV1Q53RT3 343 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 CCDC102AQ96A19 550 aa24.25■■□□□ 1.47
HOXC9-203ENST00000508190 RPAP3Q9H6T3 665 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-203ENST00000508190 CCL15-CCL14A0A0B4J2E2 113 aa24.24■■□□□ 1.47
HOXC9-203ENST00000508190 KIF5BP33176 963 aa24.24■■□□□ 1.47
HOXC9-203ENST00000508190 ANP32AP39687 249 aaKnown RBP24.24■■□□□ 1.47
HOXC9-203ENST00000508190 CCL15Q16663 113 aa24.24■■□□□ 1.47
HOXC9-203ENST00000508190 NBPF11Q86T75 865 aa24.24■■□□□ 1.47
HOXC9-203ENST00000508190 PROCA1Q8NCQ7 364 aaPredicted RBP24.24■■□□□ 1.47
HOXC9-203ENST00000508190 TMEM232C9JQI7 657 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 KLRF2D3W0D1 207 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 CETPP11597 493 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 SLC16A2P36021 539 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 SLC35G1Q2M3R5 365 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 GPATCH4Q5T3I0 446 aaKnown RBP24.23■■□□□ 1.47
HOXC9-203ENST00000508190 TMTC3Q6ZXV5 915 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 BRI3BPQ8WY22 251 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 TANGO6Q9C0B7 1094 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 UBA5Q9GZZ9 404 aa24.23■■□□□ 1.47
HOXC9-203ENST00000508190 RBM28Q9NW13 759 aaKnown RBP24.23■■□□□ 1.47
HOXC9-203ENST00000508190 GPAT2Q6NUI2 795 aa24.22■■□□□ 1.47
HOXC9-203ENST00000508190 FASTKD5Q7L8L6 764 aaKnown RBP24.22■■□□□ 1.47
HOXC9-203ENST00000508190 CCDC82Q8N4S0 544 aa24.22■■□□□ 1.47
HOXC9-203ENST00000508190 SRBD1Q8N5C6 995 aaKnown RBP24.22■■□□□ 1.47
HOXC9-203ENST00000508190 ZIC5Q96T25 663 aa24.22■■□□□ 1.47
HOXC9-203ENST00000508190 FBXO28Q9NVF7 368 aa24.22■■□□□ 1.47
HOXC9-203ENST00000508190 SMCHD1A6NHR9 2005 aa24.22■■□□□ 1.47
HOXC9-203ENST00000508190 PPFIA3O75145 1194 aa24.21■■□□□ 1.47
HOXC9-203ENST00000508190 C1QTNF8P60827 252 aa24.21■■□□□ 1.47
HOXC9-203ENST00000508190 SAMD1Q6SPF0 538 aaPredicted RBP24.21■■□□□ 1.47
HOXC9-203ENST00000508190 CAPNS2Q96L46 248 aa24.21■■□□□ 1.47
HOXC9-203ENST00000508190 AGTPBP1Q9UPW5 1226 aa24.21■■□□□ 1.47
HOXC9-203ENST00000508190 CTDNEP1O95476 244 aa24.2■■□□□ 1.47
HOXC9-203ENST00000508190 IKQ13123 557 aaPredicted RBP24.2■■□□□ 1.47
HOXC9-203ENST00000508190 PPP2R5BQ15173 497 aa24.2■■□□□ 1.47
HOXC9-203ENST00000508190 NTRK3Q16288 839 aa24.2■■□□□ 1.47
HOXC9-203ENST00000508190 A0A0G2JMZ2 1700 aa24.2■■□□□ 1.46
HOXC9-203ENST00000508190 CCDC196A0A1B0GTZ2 297 aa24.2■■□□□ 1.46
HOXC9-203ENST00000508190 BTBD19C9JJ37 291 aa24.2■■□□□ 1.46
HOXC9-203ENST00000508190 STAT2P52630 851 aa24.2■■□□□ 1.46
HOXC9-203ENST00000508190 FUT2Q10981 343 aa24.2■■□□□ 1.46
HOXC9-203ENST00000508190 CATSPERGQ6ZRH7 1159 aa24.2■■□□□ 1.46
HOXC9-203ENST00000508190 CNTNAP5Q8WYK1 1306 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 MANSC4A6NHS7 340 aaPredicted RBP24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L15C9J2P7 530 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L13C9JLJ4 530 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L11C9JVI0 530 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L18D6R9N7 530 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L22D6RA61 530 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L17D6RBQ6 530 aa24.19■■□□□ 1.46
HOXC9-203ENST00000508190 USP17L19D6RCP7 530 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms