RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 RRP36Q96EU6 259 aaKnown RBP18.73■□□□□ 0.59
SPSB4-203ENST00000508126 PHF20Q9BVI0 1012 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
SPSB4-203ENST00000508126 GGA3Q9NZ52 723 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 SEC63Q9UGP8 760 aaKnown RBP18.73■□□□□ 0.59
SPSB4-203ENST00000508126 SCAF8Q9UPN6 1271 aaKnown RBP18.73■□□□□ 0.59
SPSB4-203ENST00000508126 CAP2P40123 477 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 JAG1P78504 1218 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 SLC35G1Q2M3R5 365 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 DPY19L2Q6NUT2 758 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 NOSTRINQ8IVI9 506 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 SH3GLB2Q9NR46 395 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
SPSB4-203ENST00000508126 BAZ2BQ9UIF8 2168 aaKnown RBP18.71■□□□□ 0.59
SPSB4-203ENST00000508126 RAD21O60216 631 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 ASNSP08243 561 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 KRT2P35908 639 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 SLC1A4P43007 532 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 DCAF15Q66K64 600 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 SLFN13Q68D06 897 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 SIAH1Q8IUQ4 282 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 FAM177A1Q8N128 213 aaPredicted RBP18.71■□□□□ 0.59
SPSB4-203ENST00000508126 CCDC148Q8NFR7 591 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 GPT2Q8TD30 523 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 USP28Q96RU2 1077 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 GPCPD1Q9NPB8 672 aa18.71■□□□□ 0.59
SPSB4-203ENST00000508126 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
SPSB4-203ENST00000508126 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.59
SPSB4-203ENST00000508126 BTBD18B2RXH4 712 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 GADD45BO75293 160 aaPredicted RBP18.7■□□□□ 0.58
SPSB4-203ENST00000508126 CALML3P27482 149 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 NLRP5P59047 1200 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 CEBPZQ03701 1054 aaKnown RBP18.7■□□□□ 0.58
SPSB4-203ENST00000508126 RIOX1Q9H6W3 641 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 GOLGA6L4A6NEF3 574 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 HEATR3Q7Z4Q2 680 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 HOMER1Q86YM7 354 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 GMCL1Q96IK5 515 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 UBA5Q9GZZ9 404 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 CPVLQ9H3G5 476 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 SH2D4AQ9H788 454 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 POLR3EQ9NVU0 708 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 RTEL1Q9NZ71 1219 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 PITPNM2Q9BZ72 1349 aa18.7■□□□□ 0.58
SPSB4-203ENST00000508126 F5H6K3 240 aa18.69■□□□□ 0.58
SPSB4-203ENST00000508126 hCG_1984214I3L0E3 225 aa18.69■□□□□ 0.58
SPSB4-203ENST00000508126 HIRAP54198 1017 aaPredicted RBP18.69■□□□□ 0.58
SPSB4-203ENST00000508126 KLRC3Q07444 240 aa18.69■□□□□ 0.58
SPSB4-203ENST00000508126 ZNF713Q8N859 430 aaPredicted RBP18.69■□□□□ 0.58
SPSB4-203ENST00000508126 CCDC12Q8WUD4 166 aaPredicted RBP18.69■□□□□ 0.58
SPSB4-203ENST00000508126 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
SPSB4-203ENST00000508126 SHISA4Q96DD7 197 aa18.69■□□□□ 0.58
SPSB4-203ENST00000508126 BARHL2Q9NY43 387 aa18.69■□□□□ 0.58
SPSB4-203ENST00000508126 RCOR1Q9UKL0 485 aa18.69■□□□□ 0.58
SPSB4-203ENST00000508126 NDUFB10O96000 172 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 NBPF12Q5TAG4 269 aaPredicted RBP18.68■□□□□ 0.58
SPSB4-203ENST00000508126 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 KCTD1Q719H9 257 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
SPSB4-203ENST00000508126 GZF1Q9H116 711 aaPredicted RBP18.68■□□□□ 0.58
SPSB4-203ENST00000508126 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 GOPCQ9HD26 462 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 PHF20L1A8MW92 1017 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 YEATS4O95619 227 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 NASPP49321 788 aaPredicted RBP18.68■□□□□ 0.58
SPSB4-203ENST00000508126 NR5A1Q13285 461 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 RILPL1Q5EBL4 403 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
SPSB4-203ENST00000508126 OXER1Q8TDS5 423 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 L3MBTL3Q96JM7 780 aaPredicted RBP18.68■□□□□ 0.58
SPSB4-203ENST00000508126 PIGSQ96S52 555 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 ZNF341Q9BYN7 854 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 TMX2Q9Y320 296 aa18.68■□□□□ 0.58
SPSB4-203ENST00000508126 STXBP3O00186 592 aa18.67■□□□□ 0.58
SPSB4-203ENST00000508126 CTNND1O60716 968 aaKnown RBP18.67■□□□□ 0.58
SPSB4-203ENST00000508126 VEGFAP15692 232 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-203ENST00000508126 STK38Q15208 465 aa18.67■□□□□ 0.58
SPSB4-203ENST00000508126 ANO1Q5XXA6 986 aa18.67■□□□□ 0.58
SPSB4-203ENST00000508126 GALNT17Q6IS24 598 aa18.67■□□□□ 0.58
SPSB4-203ENST00000508126 KCNG4Q8TDN1 519 aa18.67■□□□□ 0.58
SPSB4-203ENST00000508126 SYAP1Q96A49 352 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-203ENST00000508126 A0A1W2PRG0 241 aa18.66■□□□□ 0.58
SPSB4-203ENST00000508126 BMP3P12645 472 aa18.66■□□□□ 0.58
SPSB4-203ENST00000508126 NAPAP54920 295 aa18.66■□□□□ 0.58
SPSB4-203ENST00000508126 TTBK2Q6IQ55 1244 aa18.66■□□□□ 0.58
SPSB4-203ENST00000508126 ADGRF4Q8IZF3 695 aa18.66■□□□□ 0.58
SPSB4-203ENST00000508126 ECE1P42892 770 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 SF3A1Q15459 793 aaKnown RBP18.65■□□□□ 0.58
SPSB4-203ENST00000508126 NPY5RQ15761 445 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 SUPT20HL1Q3ZLR7 823 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 LINC00301Q8NCQ3 95 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 CLIC4Q9Y696 253 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 PNMA6FA0A0J9YX94 578 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 BLIDQ8IZY5 108 aa18.65■□□□□ 0.58
SPSB4-203ENST00000508126 DAGLBQ8NCG7 672 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms