RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 SLFN13Q68D06 897 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 SLF1Q9BQI6 1058 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 SPATC1LQ9H0A9 340 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 SLC5A4Q9NY91 659 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 ZSWIM8A7E2V4 1837 aa18.46■□□□□ 0.55
COL1A1-211ENST00000507689 PEX10O60683 326 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 ZBED4O75132 1171 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 SLC25A27O95847 323 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 HMGCRP04035 888 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 ELNP15502 786 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 CYP2B6P20813 491 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 SLC1A4P43007 532 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 CCDC178Q5BJE1 867 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 NCAPG2Q86XI2 1143 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 PRPF38AQ8NAV1 312 aaKnown RBP18.45■□□□□ 0.54
COL1A1-211ENST00000507689 STAG1Q8WVM7 1258 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 ATG4CQ96DT6 458 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 RNF208Q9H0X6 261 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 PORCNQ9H237 461 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 MROH8Q9H579 483 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 BTBD7Q9P203 1132 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 PPP1R9AQ9ULJ8 1098 aa18.45■□□□□ 0.54
COL1A1-211ENST00000507689 SLC15A5A6NIM6 579 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 STRNO43815 780 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 CNMDO75829 334 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 INHAP05111 366 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 BMP3P12645 472 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-211ENST00000507689 CHMLP26374 656 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 TRDNQ13061 729 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 IQCA1Q86XH1 822 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 SHCBP1Q8NEM2 672 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 CHURC1Q8WUH1 139 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 NUP88Q99567 741 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-211ENST00000507689 CNNM2Q9H8M5 875 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 INCENPQ9NQS7 918 aa18.44■□□□□ 0.54
COL1A1-211ENST00000507689 FGRP09769 529 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 XRCC5P13010 732 aaKnown RBP18.43■□□□□ 0.54
COL1A1-211ENST00000507689 CCL5P13501 91 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 DPP9Q86TI2 863 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 KIFC2Q96AC6 838 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 APBA2Q99767 749 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 MOV10L1Q9BXT6 1211 aaKnown RBP18.43■□□□□ 0.54
COL1A1-211ENST00000507689 KRT23Q9C075 422 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 GJD2Q9UKL4 321 aa18.43■□□□□ 0.54
COL1A1-211ENST00000507689 VWA5AO00534 786 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 FDX1P10109 184 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 TOP1P11387 765 aaKnown RBP18.42■□□□□ 0.54
COL1A1-211ENST00000507689 CAPN2P17655 700 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 ERCC3P19447 782 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 PTPREP23469 700 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 STAT3P40763 770 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 STAT2P52630 851 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 MAP2K5Q13163 448 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 TTC14Q96N46 770 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 TCP11L1Q9NUJ3 509 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 FBXO28Q9NVF7 368 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 MTMR7Q9Y216 660 aa18.42■□□□□ 0.54
COL1A1-211ENST00000507689 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
COL1A1-211ENST00000507689 POTEFA5A3E0 1075 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 FCER1AP12319 257 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 SLC4A3P48751 1232 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 MORN1Q5T089 497 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 GMCL1Q96IK5 515 aa18.41■□□□□ 0.54
COL1A1-211ENST00000507689 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-211ENST00000507689 NMT2O60551 498 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 GJB1P08034 283 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 MCCP23508 829 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 KCTD2Q14681 263 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 TMEM132BQ14DG7 1078 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 MTFR1Q15390 333 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 DCAF4Q8WV16 495 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-211ENST00000507689 IL17RBQ9NRM6 502 aa18.4■□□□□ 0.54
COL1A1-211ENST00000507689 KDM4AO75164 1064 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 EN2P19622 333 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-211ENST00000507689 GRB14Q14449 540 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 SNRNP48Q6IEG0 339 aaKnown RBP18.39■□□□□ 0.53
COL1A1-211ENST00000507689 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 RIOX2Q8IUF8 465 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 ABRAQ8N0Z2 381 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 CPXCR1Q8N123 301 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 MMP19Q99542 508 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 UNC93B1Q9H1C4 597 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.53
COL1A1-211ENST00000507689 MYH4Q9Y623 1939 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms