RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 JMYQ8N9B5 988 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 LGR4Q9BXB1 951 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 ASPNQ9BXN1 380 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 MKRN2Q9H000 416 aaKnown RBP5.21□□□□□ -1.58
LSM6-205ENST00000507449 APEX2Q9UBZ4 518 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 PFDN2Q9UHV9 154 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 ZMYM5Q9UJ78 669 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 TPX2Q9ULW0 747 aaKnown RBP5.21□□□□□ -1.58
LSM6-205ENST00000507449 ZNF451Q9Y4E5 1061 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 RNF4P78317 190 aa5.2□□□□□ -1.58
LSM6-205ENST00000507449 AUHQ13825 339 aaKnown RBP5.2□□□□□ -1.58
LSM6-205ENST00000507449 ANKRD39Q53RE8 183 aa5.2□□□□□ -1.58
LSM6-205ENST00000507449 SDE2Q6IQ49 451 aa5.2□□□□□ -1.58
LSM6-205ENST00000507449 FBXL6Q8N531 539 aa5.2□□□□□ -1.58
LSM6-205ENST00000507449 SH3TC2Q8TF17 1288 aa5.2□□□□□ -1.58
LSM6-205ENST00000507449 SMARCC1Q92922 1105 aaPredicted RBP5.2□□□□□ -1.58
LSM6-205ENST00000507449 FGD4Q96M96 766 aa5.2□□□□□ -1.58
LSM6-205ENST00000507449 PRDM5Q9NQX1 630 aaPredicted RBP5.2□□□□□ -1.58
LSM6-205ENST00000507449 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
LSM6-205ENST00000507449 ANKRD34BA5PLL1 514 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 ADCY3O60266 1144 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 CAPNS1P04632 268 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 ZNF865P0CJ78 1059 aaPredicted RBP5.19□□□□□ -1.58
LSM6-205ENST00000507449 CD247P20963 164 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 NFIAQ12857 509 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
LSM6-205ENST00000507449 SQSTM1Q13501 440 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 HEATR6Q6AI08 1181 aaKnown RBP5.19□□□□□ -1.58
LSM6-205ENST00000507449 C22orf34Q6ZV56 151 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 C7orf61Q8IZ16 206 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 DTWD2Q8NBA8 298 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 ZNF669Q96BR6 464 aaPredicted RBP5.19□□□□□ -1.58
LSM6-205ENST00000507449 PRDM14Q9GZV8 571 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 GP6Q9HCN6 339 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 KDM2BQ8NHM5 1336 aa5.19□□□□□ -1.58
LSM6-205ENST00000507449 A0A1W2PQU0 124 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 SHISA3A0PJX4 238 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 IGF2BP3O00425 579 aaKnown RBP eCLIP5.18□□□□□ -1.58
LSM6-205ENST00000507449 TBX1O43435 398 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 CBX7O95931 251 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 FSTP19883 344 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 ZNF143P52747 638 aaPredicted RBP5.18□□□□□ -1.58
LSM6-205ENST00000507449 ZNF445P59923 1031 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 SSRP1Q08945 709 aaKnown RBP5.18□□□□□ -1.58
LSM6-205ENST00000507449 TCEAL1Q15170 157 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 C2orf27AQ580R0 203 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 SFRP5Q5T4F7 317 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 TMC3Q7Z5M5 1100 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 SHKBP1Q8TBC3 707 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 DBNDD2Q9BQY9 259 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 EPN3Q9H201 632 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 MINPP1Q9UNW1 487 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 LEMD3Q9Y2U8 911 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 CAPN6Q9Y6Q1 641 aa5.18□□□□□ -1.58
LSM6-205ENST00000507449 ESYT3A0FGR9 886 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 ENPP3O14638 875 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 ITGAVP06756 1048 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 FAM153BP0C7A2 387 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 CYP7A1P22680 504 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 OXCT1P55809 520 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 TNK2Q07912 1038 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 ZNF662Q6ZS27 426 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 ZNF227Q86WZ6 799 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 FAM181AQ8N9Y4 354 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 ADCY4Q8NFM4 1077 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 GIMAP7Q8NHV1 300 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 BRF1Q92994 677 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 MRGPRX3Q96LB0 322 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 APBA2Q99767 749 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 SPATA9Q9BWV2 254 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 ARHGEF4Q9NR80 690 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 GFOD1Q9NXC2 390 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 WHRNQ9P202 907 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 PCDHB12Q9Y5F1 795 aa5.17□□□□□ -1.58
LSM6-205ENST00000507449 WDR64B1ANS9 1081 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 PRAMEF1O95521 474 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 IGLV1-40P01703 118 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 KIR3DL1P43629 444 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 CHMP4BP1P59074 171 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 NKPD1Q17RQ9 610 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 SV2CQ496J9 727 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 CYP27C1Q4G0S4 372 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 FOXB2Q5VYV0 432 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 EGFLAMQ63HQ2 1017 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 ZDHHC13Q8IUH4 622 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 SPACA3Q8IXA5 215 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 MFSD4AQ8N468 514 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 THAP3Q8WTV1 239 aaPredicted RBP5.16□□□□□ -1.58
LSM6-205ENST00000507449 COX4I2Q96KJ9 171 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 TMEM260Q9NX78 707 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 GTF2IRD1Q9UHL9 959 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 FBXL21Q9UKT6 434 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 PLAGL2Q9UPG8 496 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 ST14Q9Y5Y6 855 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 FHOD1Q9Y613 1164 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 PTCH2Q9Y6C5 1203 aa5.16□□□□□ -1.58
LSM6-205ENST00000507449 PRR19A6NJB7 356 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 WASH4PA8MWX3 477 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 SIGLEC6O43699 453 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 SRFP11831 508 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms