RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, human

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK1-208	ENST00000507292	GBP2	P32456	591 aa	Predicted RBP	4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	CHMP4BP1	P59074	171 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	SRSF3	P84103	164 aa	Known RBP	4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	NMI	Q13287	307 aa	Predicted RBP	4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	ZNF385B	Q569K4	471 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	SNAP47	Q5SQN1	464 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	WAPL	Q7Z5K2	1190 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	NLRX1	Q86UT6	975 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	USHBP1	Q8N6Y0	703 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	FBXO27	Q8NI29	283 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	PANK1	Q8TE04	598 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	FOXP3	Q9BZS1	431 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	ZNF281	Q9Y2X9	895 aa		4.39	□□□□□ -1.71
SRPK1-208	ENST00000507292	ZBTB7C	A1YPR0	619 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	RFXAP	O00287	272 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	TRIM13	O60858	407 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	FKTN	O75072	461 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	XPC	Q01831	940 aa	Predicted RBP	4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	SLC14A2	Q15849	920 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	ZPBP2	Q6X784	338 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	CEP128	Q6ZU80	1094 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	TMC3	Q7Z5M5	1100 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	RELL1	Q8IUW5	271 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	MARCH10	Q8NA82	808 aa	Predicted RBP	4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	GOLM1	Q8NBJ4	401 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	VWCE	Q96DN2	955 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	RHOV	Q96L33	236 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	TMEM74	Q96NL1	305 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	KCNC2	Q96PR1	638 aa		4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	MBD1	Q9UIS9	605 aa	Predicted RBP	4.38	□□□□□ -1.71
SRPK1-208	ENST00000507292	SSU72P8	A0A1W2PR75	194 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	PATL2	C9JE40	543 aa	Known RBP	4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	TLR3	O15455	904 aa	Known RBP	4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	FOXD2	O60548	495 aa	Predicted RBP	4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	EPHB3	P54753	998 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	SNW1	Q13573	536 aa	Known RBP	4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	RNF111	Q6ZNA4	994 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	TMC4	Q7Z404	712 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	ENOX1	Q8TC92	643 aa	Known RBP	4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	TCTN2	Q96GX1	697 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	MAP6	Q96JE9	813 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	TRAIP	Q9BWF2	469 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	HDAC8	Q9BY41	377 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	SIRT5	Q9NXA8	310 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	TCFL5	Q9UL49	500 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	IRAK3	Q9Y616	596 aa		4.37	□□□□□ -1.71
SRPK1-208	ENST00000507292	TMEM82	A0PJX8	343 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	RGS13	O14921	159 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	NRDC	O43847	1150 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	UBOX5	O94941	541 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	SYP	P08247	313 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	VIPR1	P32241	457 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	PCBP3	P57721	371 aa	Known RBP	4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	ARSH	Q5FYA8	562 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	REC114	Q7Z4M0	266 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	TMEM151B	Q8IW70	566 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	DAGLB	Q8NCG7	672 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	CRELD1	Q96HD1	420 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	HHIPL1	Q96JK4	782 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	SIGLEC10	Q96LC7	697 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	PLCD4	Q9BRC7	762 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	RSRP1	Q9BUV0	290 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	CNTD2	Q9H8S5	307 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	MINPP1	Q9UNW1	487 aa		4.36	□□□□□ -1.71
SRPK1-208	ENST00000507292	SLC22A31	A6NKX4	558 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	RAG1	P15918	1043 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	GART	P22102	1010 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	POLR2B	P30876	1174 aa	Known RBP	4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	KIR2DL1	P43626	348 aa	Predicted RBP	4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	KIR2DL2	P43627	348 aa	Predicted RBP	4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	RNF4	P78317	190 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	KRTAP1-1	Q07627	177 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	MPP2	Q14168	576 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	NFIX	Q14938	502 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	KIR3DS1	Q14943	382 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	VMAC	Q2NL98	169 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	NBPF9	Q3BBW0	867 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	AEBP1	Q8IUX7	1158 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	ZNF655	Q8N720	491 aa	Predicted RBP	4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	DACT3	Q96B18	629 aa	Predicted RBP	4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	CRTAC1	Q9NQ79	661 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	VTI1B	Q9UEU0	232 aa		4.35	□□□□□ -1.71
SRPK1-208	ENST00000507292	SORBS3	O60504	671 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	PNLIP	P16233	465 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	SYN1	P17600	705 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	AFF3	P51826	1226 aa	Known RBP	4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	RTP1	P59025	263 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	TAGLN	Q01995	201 aa	Known RBP	4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	MLEC	Q14165	292 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	BBS9	Q3SYG4	887 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	FAM196A	Q6ZSG2	479 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	LINC00116	Q8NCU8	138 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	FEZF2	Q8TBJ5	459 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	XYLT2	Q9H1B5	865 aa		4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.34	□□□□□ -1.71
SRPK1-208	ENST00000507292	BRMS1	Q9HCU9	246 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms