RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 TMEM82A0PJX8 343 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 BTBD11A6QL63 1104 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 NOTOA8MTQ0 251 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 RNF4P78317 190 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 LINC01599Q8WXQ3 324 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 FAM84AQ96KN4 292 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 DIRC2Q96SL1 478 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 PRDM14Q9GZV8 571 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 METTL5Q9NRN9 209 aaKnown RBP7.06□□□□□ -1.28
TRIO-208ENST00000506611 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
TRIO-208ENST00000506611 ZNRF3Q9ULT6 936 aa7.06□□□□□ -1.28
TRIO-208ENST00000506611 ARID1BQ8NFD5 2236 aaPredicted RBP7.05□□□□□ -1.28
TRIO-208ENST00000506611 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
TRIO-208ENST00000506611 PRAMEF1O95521 474 aa7.05□□□□□ -1.28
TRIO-208ENST00000506611 METTL16Q86W50 562 aaKnown RBP7.05□□□□□ -1.28
TRIO-208ENST00000506611 KSR1Q8IVT5 923 aa7.05□□□□□ -1.28
TRIO-208ENST00000506611 TCTN2Q96GX1 697 aa7.05□□□□□ -1.28
TRIO-208ENST00000506611 SLC6A18Q96N87 628 aa7.05□□□□□ -1.28
TRIO-208ENST00000506611 CLEC3AO75596 197 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 RAC2P15153 192 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 VAMP1P23763 118 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 CCNFP41002 786 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 GALK1P51570 392 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 TRIM26Q12899 539 aaPredicted RBP7.04□□□□□ -1.28
TRIO-208ENST00000506611 CLEC16AQ2KHT3 1053 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 BBS9Q3SYG4 887 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 DAGLBQ8NCG7 672 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 ENOX1Q8TC92 643 aaKnown RBP7.04□□□□□ -1.28
TRIO-208ENST00000506611 SHISA4Q96DD7 197 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 FOXP3Q9BZS1 431 aa7.04□□□□□ -1.28
TRIO-208ENST00000506611 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
TRIO-208ENST00000506611 FAM86C2PA6NEL3 165 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 C9IYK1 514 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 SHOXO15266 292 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 SIGLEC6O43699 453 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 CTSKP43235 329 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 NR0B2Q15466 257 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 SYDE1Q6ZW31 735 aaPredicted RBP7.03□□□□□ -1.28
TRIO-208ENST00000506611 HOMEZQ8IX15 550 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 RNF34Q969K3 372 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 PPT2Q9UMR5 302 aa7.03□□□□□ -1.28
TRIO-208ENST00000506611 FITM1A5D6W6 292 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 UNCXA6NJT0 531 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 DBX1A6NMT0 343 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 PSPNO60542 156 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 CEBPAP49715 358 aaPredicted RBP7.02□□□□□ -1.29
TRIO-208ENST00000506611 RAD51AP2Q09MP3 1159 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
TRIO-208ENST00000506611 LRRFIP1Q32MZ4 808 aaKnown RBP7.02□□□□□ -1.29
TRIO-208ENST00000506611 RUFY4Q6ZNE9 571 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 PPFIBP1Q86W92 1011 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 ZNF655Q8N720 491 aaPredicted RBP7.02□□□□□ -1.29
TRIO-208ENST00000506611 KIAA1522Q9P206 1035 aaPredicted RBP7.02□□□□□ -1.29
TRIO-208ENST00000506611 TCFL5Q9UL49 500 aa7.02□□□□□ -1.29
TRIO-208ENST00000506611 CECR2Q9BXF3 1484 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 TSPAN15O95858 294 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 RNF111Q6ZNA4 994 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 OXR1Q8N573 874 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 BHLHE22Q8NFJ8 381 aaPredicted RBP7.01□□□□□ -1.29
TRIO-208ENST00000506611 SLC38A3Q99624 504 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
TRIO-208ENST00000506611 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
TRIO-208ENST00000506611 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
TRIO-208ENST00000506611 SCAMP3O14828 347 aaKnown RBP7□□□□□ -1.29
TRIO-208ENST00000506611 FKTNO75072 461 aa7□□□□□ -1.29
TRIO-208ENST00000506611 USP2O75604 605 aaPredicted RBP7□□□□□ -1.29
TRIO-208ENST00000506611 SYPP08247 313 aa7□□□□□ -1.29
TRIO-208ENST00000506611 C1QTNF9P0C862 333 aa7□□□□□ -1.29
TRIO-208ENST00000506611 RPL10P27635 214 aaKnown RBP7□□□□□ -1.29
TRIO-208ENST00000506611 INTS3Q68E01 1043 aaKnown RBP7□□□□□ -1.29
TRIO-208ENST00000506611 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
TRIO-208ENST00000506611 LILRA2Q8N149 483 aa7□□□□□ -1.29
TRIO-208ENST00000506611 LINC00116Q8NCU8 138 aa7□□□□□ -1.29
TRIO-208ENST00000506611 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
TRIO-208ENST00000506611 MKRN2Q9H000 416 aaKnown RBP7□□□□□ -1.29
TRIO-208ENST00000506611 MEIS1O00470 390 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 HDLBPQ00341 1268 aaKnown RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 PAK2Q13177 524 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 AUHQ13825 339 aaKnown RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 PKN1Q16512 942 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 LSRQ86X29 649 aaPredicted RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 C1QL4Q86Z23 238 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 TAB3Q8N5C8 712 aaPredicted RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 ANKS4BQ8N8V4 417 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 RBBP8NLQ8NC74 664 aaPredicted RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 FBXO15Q8NCQ5 510 aaPredicted RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 MAP6Q96JE9 813 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 HHIPL1Q96JK4 782 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 EPB41L4BQ9H329 900 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 DCP1AQ9NPI6 582 aaPredicted RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 CHST7Q9NS84 486 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 GINM1Q9NU53 330 aa6.99□□□□□ -1.29
TRIO-208ENST00000506611 YBX2Q9Y2T7 364 aaKnown RBP6.99□□□□□ -1.29
TRIO-208ENST00000506611 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
TRIO-208ENST00000506611 CHRNEQ04844 493 aa6.98□□□□□ -1.29
TRIO-208ENST00000506611 DUSP4Q13115 394 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms