RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 XPNPEP3Q9NQH7 507 aa9.95□□□□□ -0.82
SNF8-204ENST00000506104 PARP14Q460N5 1801 aa9.95□□□□□ -0.82
SNF8-204ENST00000506104 ZNF236Q9UL36 1845 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 IGSF3O75054 1194 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 FOSL2P15408 326 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 RAG1P15918 1043 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 TLE2Q04725 743 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 KCTD2Q14681 263 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 OLFML2BQ68BL8 750 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 MB21D1Q8N884 522 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 SHCBP1Q8NEM2 672 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 PPM1EQ8WY54 764 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 LENG1Q96BZ8 264 aaPredicted RBP9.94□□□□□ -0.82
SNF8-204ENST00000506104 CHMP4CQ96CF2 233 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 MAML3Q96JK9 1138 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNF8-204ENST00000506104 PDLIM7Q9NR12 457 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 SWAP70Q9UH65 585 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 SLC4A4Q9Y6R1 1079 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 MCM3APO60318 1980 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 MYH4Q9Y623 1939 aa9.94□□□□□ -0.82
SNF8-204ENST00000506104 A0A0G2JMZ2 1700 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 TRIM43BA6NCK2 446 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 EEF2P13639 858 aaKnown RBP9.93□□□□□ -0.82
SNF8-204ENST00000506104 TMEM132BQ14DG7 1078 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 FAM83BQ5T0W9 1011 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 FAM109BQ6ICB4 259 aaPredicted RBP9.93□□□□□ -0.82
SNF8-204ENST00000506104 RNF180Q86T96 592 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 TRIM43Q96BQ3 446 aaPredicted RBP9.93□□□□□ -0.82
SNF8-204ENST00000506104 DDX11Q96FC9 970 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 SEMA6BQ9H3T3 888 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 VCPKMTQ9H867 229 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 TMEM39AQ9NV64 488 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 FBXO28Q9NVF7 368 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 PAG1Q9NWQ8 432 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 ZHX1Q9UKY1 873 aaPredicted RBP9.93□□□□□ -0.82
SNF8-204ENST00000506104 CNPY2Q9Y2B0 182 aa9.93□□□□□ -0.82
SNF8-204ENST00000506104 SZT2Q5T011 3432 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 USP17L12C9JPN9 530 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 USP17L21D6R901 530 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 SMIM22K7EJ46 135 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 WDR46O15213 610 aaKnown RBP9.92□□□□□ -0.82
SNF8-204ENST00000506104 HMMRO75330 724 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 SLC25A27O95847 323 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 CLTBP09497 229 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 TAL1P17542 331 aaPredicted RBP9.92□□□□□ -0.82
SNF8-204ENST00000506104 STAT3P40763 770 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 CDK8P49336 464 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 GABPAQ06546 454 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 CCDC129Q6ZRS4 1044 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 CPXCR1Q8N123 301 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 KIF1BPQ96EK5 621 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 NUP88Q99567 741 aaPredicted RBP9.92□□□□□ -0.82
SNF8-204ENST00000506104 TACC3Q9Y6A5 838 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 MYO9BQ13459 2157 aa9.92□□□□□ -0.82
SNF8-204ENST00000506104 A0A1W2PQ45 241 aaPredicted RBP9.91□□□□□ -0.82
SNF8-204ENST00000506104 A0A1W2PQY0 241 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 DCDC2CA8MYV0 355 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 MINDY4BA8MYZ0 360 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 FPGSQ05932 587 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 SNRNP48Q6IEG0 339 aaKnown RBP9.91□□□□□ -0.82
SNF8-204ENST00000506104 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
SNF8-204ENST00000506104 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
SNF8-204ENST00000506104 CCDC17Q96LX7 622 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 TINF2Q9BSI4 451 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 MKNK2Q9HBH9 465 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 STARD7Q9NQZ5 370 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 ATP8A2Q9NTI2 1148 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 COG6Q9Y2V7 657 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 TMX2Q9Y320 296 aa9.91□□□□□ -0.82
SNF8-204ENST00000506104 RANBP2P49792 3224 aaKnown RBP9.9□□□□□ -0.82
SNF8-204ENST00000506104 TCRBV5S4A2TA0A5A2 114 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 CHGBP05060 677 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 APPP05067 770 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 AKR1A1P14550 325 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 ADD2P35612 726 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 ABRAQ8N0Z2 381 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 TTYH1Q9H313 450 aaPredicted RBP9.9□□□□□ -0.82
SNF8-204ENST00000506104 KANSL2Q9H9L4 492 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 PHF24Q9UPV7 400 aa9.9□□□□□ -0.82
SNF8-204ENST00000506104 VWA5AO00534 786 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 SMARCA5O60264 1052 aaPredicted RBP9.89□□□□□ -0.83
SNF8-204ENST00000506104 C6orf222P0C671 652 aaPredicted RBP9.89□□□□□ -0.83
SNF8-204ENST00000506104 MS4A1P11836 297 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 ITGB8P26012 769 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 EPHB4P54760 987 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 SMAD3P84022 425 aaKnown RBP9.89□□□□□ -0.83
SNF8-204ENST00000506104 IKQ13123 557 aaPredicted RBP9.89□□□□□ -0.83
SNF8-204ENST00000506104 C12orf60Q5U649 245 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 C16orf86Q6ZW13 317 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 RIOX2Q8IUF8 465 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 SIAH1Q8IUQ4 282 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 NUP133Q8WUM0 1156 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 KIFC2Q96AC6 838 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 SLF1Q9BQI6 1058 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 PPP1R12CQ9BZL4 782 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 HOMER2Q9NSB8 354 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 FAM184BQ9ULE4 1060 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms