RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 SYDE1Q6ZW31 735 aaPredicted RBP8.72□□□□□ -1.01
CHD1-204ENST00000505982 CYFIP1Q7L576 1253 aa8.72□□□□□ -1.01
CHD1-204ENST00000505982 KIRREL1Q96J84 757 aa8.72□□□□□ -1.01
CHD1-204ENST00000505982 TM9SF2Q99805 663 aa8.72□□□□□ -1.01
CHD1-204ENST00000505982 KLHL3Q9UH77 587 aa8.72□□□□□ -1.01
CHD1-204ENST00000505982 MAPK8IP1Q9UQF2 711 aa8.72□□□□□ -1.01
CHD1-204ENST00000505982 PRR36Q9H6K5 1346 aa8.72□□□□□ -1.01
CHD1-204ENST00000505982 ANKRD62A6NC57 917 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 DDAH1O94760 285 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 EOMESO95936 686 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 HSP90B1P14625 803 aaKnown RBP8.71□□□□□ -1.02
CHD1-204ENST00000505982 NCLP19338 710 aaKnown RBP8.71□□□□□ -1.02
CHD1-204ENST00000505982 GUCY2CP25092 1073 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 GRK4P32298 578 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 NTF4P34130 210 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 CASP7P55210 303 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 TMEM67Q5HYA8 995 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 OVOS1Q6IE37 1185 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 GMIPQ9P107 970 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 TACC3Q9Y6A5 838 aa8.71□□□□□ -1.02
CHD1-204ENST00000505982 FAM221BA6H8Z2 402 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 MEIS3P2A8K0S8 358 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 CLSTN1O94985 981 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 RING1Q06587 406 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 ZBTB37Q5TC79 503 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 PRR23BQ6ZRT6 265 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 TTC6Q86TZ1 520 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 SIAH1Q8IUQ4 282 aa8.7□□□□□ -1.02
CHD1-204ENST00000505982 LRRC56Q8IYG6 542 aaPredicted RBP8.7□□□□□ -1.02
CHD1-204ENST00000505982 C19orf47Q8N9M1 422 aaKnown RBP8.7□□□□□ -1.02
CHD1-204ENST00000505982 CARS2Q9HA77 564 aaKnown RBP8.7□□□□□ -1.02
CHD1-204ENST00000505982 NLGN1Q8N2Q7 840 aa8.69□□□□□ -1.02
CHD1-204ENST00000505982 CCDC113Q9H0I3 377 aa8.69□□□□□ -1.02
CHD1-204ENST00000505982 SLC12A7Q9Y666 1083 aa8.69□□□□□ -1.02
CHD1-204ENST00000505982 A0A1W2PQH9 124 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 FAM86C2PA6NEL3 165 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 FAM155AB1AL88 458 aaPredicted RBP8.68□□□□□ -1.02
CHD1-204ENST00000505982 PDPK1O15530 556 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 LRIG2O94898 1065 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 GDNFP39905 211 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 CHMP4BP1P59074 171 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 ARMCX6Q7L4S7 300 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 NLRC3Q7RTR2 1065 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 UBE3DQ7Z6J8 389 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 C1QL4Q86Z23 238 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 WNT10AQ9GZT5 417 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 MSRB2Q9Y3D2 182 aa8.68□□□□□ -1.02
CHD1-204ENST00000505982 SLC22A31A6NKX4 558 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 NFIBO00712 420 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 GJB6O95452 261 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 ZNF865P0CJ78 1059 aaPredicted RBP8.67□□□□□ -1.02
CHD1-204ENST00000505982 NME1P15531 152 aaKnown RBP8.67□□□□□ -1.02
CHD1-204ENST00000505982 RAG1P15918 1043 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 ARSHQ5FYA8 562 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 C6orf15Q6UXA7 325 aaPredicted RBP8.67□□□□□ -1.02
CHD1-204ENST00000505982 FAM13CQ8NE31 585 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 ZNF507Q8TCN5 953 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 CCDC120Q96HB5 630 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 HSPA12BQ96MM6 686 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 DNAJC7Q99615 494 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 SEMA3GQ9NS98 782 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 ADAM30Q9UKF2 790 aa8.67□□□□□ -1.02
CHD1-204ENST00000505982 KRTAP9-7A8MTY7 169 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 B2RBV5 119 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 RASGRF1Q13972 1273 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 MTERF2Q49AM1 385 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 FAM178BQ8IXR5 827 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 FBXO15Q8NCQ5 510 aaPredicted RBP8.66□□□□□ -1.02
CHD1-204ENST00000505982 ATP13A1Q9HD20 1204 aa8.66□□□□□ -1.02
CHD1-204ENST00000505982 TPX2Q9ULW0 747 aaKnown RBP8.66□□□□□ -1.02
CHD1-204ENST00000505982 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD1-204ENST00000505982 CHURC1-FNTBB4DL54 471 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 DNAJA2O60884 412 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 C1QTNF9P0C862 333 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 ZSCAN22P10073 491 aaPredicted RBP8.65□□□□□ -1.02
CHD1-204ENST00000505982 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.02
CHD1-204ENST00000505982 TCEAL1Q15170 157 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 SFRP5Q5T4F7 317 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 CDKAL1Q5VV42 579 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 LILRA6Q6PI73 481 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 UNC5AQ6ZN44 842 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 ZNF662Q6ZS27 426 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 PHACTR4Q8IZ21 702 aa8.65□□□□□ -1.02
CHD1-204ENST00000505982 TAB3Q8N5C8 712 aaPredicted RBP8.65□□□□□ -1.02
CHD1-204ENST00000505982 ACSF2Q96CM8 615 aaPredicted RBP8.65□□□□□ -1.02
CHD1-204ENST00000505982 PPM1GO15355 546 aaPredicted RBP8.64□□□□□ -1.03
CHD1-204ENST00000505982 SLITRK5O94991 958 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 HSD3B2P26439 372 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 ZYXQ15942 572 aaKnown RBP8.64□□□□□ -1.03
CHD1-204ENST00000505982 EGFLAMQ63HQ2 1017 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 C22orf34Q6ZV56 151 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 MFSD4AQ8N468 514 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 SH3TC2Q8TF17 1288 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 RNPC3Q96LT9 517 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms