RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 FOXP3Q9BZS1 431 aa6.91□□□□□ -1.3
LINC00616-202ENST00000505874 PRDM14Q9GZV8 571 aa6.91□□□□□ -1.3
LINC00616-202ENST00000505874 MKRN2Q9H000 416 aaKnown RBP6.91□□□□□ -1.3
LINC00616-202ENST00000505874 PRAMEF1O95521 474 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 RPL10P27635 214 aaKnown RBP6.9□□□□□ -1.3
LINC00616-202ENST00000505874 CCNFP41002 786 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 RACK1P63244 317 aaKnown RBP6.9□□□□□ -1.3
LINC00616-202ENST00000505874 USHBP1Q8N6Y0 703 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 ENOX1Q8TC92 643 aaKnown RBP6.9□□□□□ -1.3
LINC00616-202ENST00000505874 TCTN2Q96GX1 697 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 FERD3LQ96RJ6 166 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
LINC00616-202ENST00000505874 EBF1Q9UH73 591 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 MINPP1Q9UNW1 487 aa6.9□□□□□ -1.3
LINC00616-202ENST00000505874 SSU72P8A0A1W2PR75 194 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 FITM1A5D6W6 292 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 TNFRSF10CO14798 259 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 FKTNO75072 461 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 DUSP4Q13115 394 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 RNF111Q6ZNA4 994 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 ZNF655Q8N720 491 aaPredicted RBP6.89□□□□□ -1.31
LINC00616-202ENST00000505874 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
LINC00616-202ENST00000505874 TCFL5Q9UL49 500 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 ZNRF3Q9ULT6 936 aa6.89□□□□□ -1.31
LINC00616-202ENST00000505874 DBX1A6NMT0 343 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 MEIS1O00470 390 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
LINC00616-202ENST00000505874 SYPP08247 313 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
LINC00616-202ENST00000505874 TRIM26Q12899 539 aaPredicted RBP6.88□□□□□ -1.31
LINC00616-202ENST00000505874 SPPL2CQ8IUH8 684 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 LILRA2Q8N149 483 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 FBXO15Q8NCQ5 510 aaPredicted RBP6.88□□□□□ -1.31
LINC00616-202ENST00000505874 GPR160Q9UJ42 338 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 ZMYM5Q9UJ78 669 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 FBXL21Q9UKT6 434 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 PPT2Q9UMR5 302 aa6.88□□□□□ -1.31
LINC00616-202ENST00000505874 SIGLEC6O43699 453 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 ACRP10323 421 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 RAP1GAPP47736 663 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 GALK1P51570 392 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 CHRNEQ04844 493 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 ANKS4BQ8N8V4 417 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 LINC01599Q8WXQ3 324 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 PPP1R16BQ96T49 567 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 G6PC3Q9BUM1 346 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 CHST7Q9NS84 486 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 GFOD1Q9NXC2 390 aa6.87□□□□□ -1.31
LINC00616-202ENST00000505874 TMEM82A0PJX8 343 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 USP2O75604 605 aaPredicted RBP6.86□□□□□ -1.31
LINC00616-202ENST00000505874 IMPDH2P12268 514 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 NR0B2Q15466 257 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 TDRD10Q5VZ19 366 aaKnown RBP6.86□□□□□ -1.31
LINC00616-202ENST00000505874 ZPBP2Q6X784 338 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 LINC00116Q8NCU8 138 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 SUCOQ9UBS9 1254 aaKnown RBP6.86□□□□□ -1.31
LINC00616-202ENST00000505874 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 PCDHB12Q9Y5F1 795 aa6.86□□□□□ -1.31
LINC00616-202ENST00000505874 C9IYK1 514 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 PSPNO60542 156 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 TSPAN15O95858 294 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 VAMP1P23763 118 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 PAK2Q13177 524 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 AUHQ13825 339 aaKnown RBP6.85□□□□□ -1.31
LINC00616-202ENST00000505874 C9orf131Q5VYM1 1079 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 RUFY4Q6ZNE9 571 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 SIRT2Q8IXJ6 389 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 ZNF654Q8IZM8 581 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
LINC00616-202ENST00000505874 MRRFQ96E11 262 aaKnown RBP6.85□□□□□ -1.31
LINC00616-202ENST00000505874 MAP6Q96JE9 813 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 DHRS1Q96LJ7 313 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 SLC6A17Q9H1V8 727 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 CWC22Q9HCG8 908 aaKnown RBP6.85□□□□□ -1.31
LINC00616-202ENST00000505874 FAM86C1Q9NVL1 165 aa6.85□□□□□ -1.31
LINC00616-202ENST00000505874 C1QTNF9P0C862 333 aa6.84□□□□□ -1.31
LINC00616-202ENST00000505874 PDE6BP35913 854 aa6.84□□□□□ -1.31
LINC00616-202ENST00000505874 SLC14A2Q15849 920 aa6.84□□□□□ -1.31
LINC00616-202ENST00000505874 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
LINC00616-202ENST00000505874 INTS3Q68E01 1043 aaKnown RBP6.84□□□□□ -1.31
LINC00616-202ENST00000505874 CCDC81Q6ZN84 652 aa6.84□□□□□ -1.31
LINC00616-202ENST00000505874 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.31
LINC00616-202ENST00000505874 INTS4Q96HW7 963 aaKnown RBP6.84□□□□□ -1.31
LINC00616-202ENST00000505874 HHIPL1Q96JK4 782 aa6.84□□□□□ -1.31
LINC00616-202ENST00000505874 GINM1Q9NU53 330 aa6.84□□□□□ -1.31
LINC00616-202ENST00000505874 YBX2Q9Y2T7 364 aaKnown RBP6.84□□□□□ -1.31
LINC00616-202ENST00000505874 NOTOA8MTQ0 251 aa6.83□□□□□ -1.32
LINC00616-202ENST00000505874 NFIBO00712 420 aa6.83□□□□□ -1.32
LINC00616-202ENST00000505874 EFEMP2O95967 443 aa6.83□□□□□ -1.32
LINC00616-202ENST00000505874 KRT1P04264 644 aa6.83□□□□□ -1.32
LINC00616-202ENST00000505874 TMEM253P0C7T8 217 aa6.83□□□□□ -1.32
LINC00616-202ENST00000505874 CTSKP43235 329 aa6.83□□□□□ -1.32
LINC00616-202ENST00000505874 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms