RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 COG2Q14746 738 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 MFSD14CQ5VZR4 134 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 GPR153Q6NV75 609 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 CERS3Q8IU89 383 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 ERC1Q8IUD2 1116 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 SPICE1Q8N0Z3 855 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 LPAR1Q92633 364 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 ATG4CQ96DT6 458 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 CRNKL1Q9BZJ0 848 aaKnown RBP7.09□□□□□ -1.27
GYPB-205ENST00000505583 TANGO6Q9C0B7 1094 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 SPATC1LQ9H0A9 340 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 FBXO28Q9NVF7 368 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 IVNS1ABPQ9Y6Y0 642 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 GREB1LQ9C091 1923 aaPredicted RBP7.09□□□□□ -1.27
GYPB-205ENST00000505583 DNAH12Q6ZR08 3092 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 POTEB2H3BUK9 544 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 DNM1LO00429 736 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 FLOT1O75955 427 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 MBD4O95243 580 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 ADD2P35612 726 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 CLCN6P51797 869 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 RTP1P59025 263 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 TTF1Q15361 905 aaPredicted RBP7.08□□□□□ -1.28
GYPB-205ENST00000505583 C9orf50Q5SZB4 431 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 TMEM179Q6ZVK1 233 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 DPP9Q86TI2 863 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.08□□□□□ -1.28
GYPB-205ENST00000505583 FAM161BQ96MY7 647 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 GUCD1Q96NT3 240 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.08□□□□□ -1.28
GYPB-205ENST00000505583 BOLA2Q9H3K6 86 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 ZBTB40Q9NUA8 1239 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 HOXC10Q9NYD6 342 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 STXBP5LQ9Y2K9 1186 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 COG6Q9Y2V7 657 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 TMX2Q9Y320 296 aa7.08□□□□□ -1.28
GYPB-205ENST00000505583 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 USP17L21D6R901 530 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 PGK2P07205 417 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 IFIT2P09913 472 aaKnown RBP7.07□□□□□ -1.28
GYPB-205ENST00000505583 EEF2P13639 858 aaKnown RBP7.07□□□□□ -1.28
GYPB-205ENST00000505583 TAL1P17542 331 aaPredicted RBP7.07□□□□□ -1.28
GYPB-205ENST00000505583 ITGB8P26012 769 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 ADCYAP1R1P41586 468 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 CDK8P49336 464 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 PLS1Q14651 629 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 TMEM132BQ14DG7 1078 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 SHHQ15465 462 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 TRIM60Q495X7 471 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 FAM47AQ5JRC9 791 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 C12orf60Q5U649 245 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 TMED8Q6PL24 325 aaPredicted RBP7.07□□□□□ -1.28
GYPB-205ENST00000505583 SLC39A5Q6ZMH5 540 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 NCAPG2Q86XI2 1143 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
GYPB-205ENST00000505583 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 FERMT2Q96AC1 680 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 KIF1BPQ96EK5 621 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 MAML3Q96JK9 1138 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 MFRPQ9BY79 579 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 VCPKMTQ9H867 229 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 PAG1Q9NWQ8 432 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 ADAMTS5Q9UNA0 930 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 ATP11BQ9Y2G3 1177 aa7.07□□□□□ -1.28
GYPB-205ENST00000505583 MYH4Q9Y623 1939 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 TRIM43BA6NCK2 446 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 SEPT4O43236 478 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 STRNO43815 780 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 SMARCA5O60264 1052 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 MSCO60682 206 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 ATP5JP18859 108 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 EPHB4P54760 987 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 ICA1Q05084 483 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 SNX17Q15036 470 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 LRRC41Q15345 812 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 TMEM132AQ24JP5 1023 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 HSP90AB4PQ58FF6 505 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 C20orf194Q5TEA3 1177 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 CTR9Q6PD62 1173 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 RPAP2Q8IXW5 612 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 EFCAB3Q8N7B9 438 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 ARRDC4Q8NCT1 418 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 REPS2Q8NFH8 660 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 BADQ92934 168 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 TRIM43Q96BQ3 446 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 HAUS7Q99871 368 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 LBHD1Q9BQE6 289 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 PUS7LQ9H0K6 701 aaKnown RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 MROH8Q9H579 483 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 PRDM5Q9NQX1 630 aaPredicted RBP7.06□□□□□ -1.28
GYPB-205ENST00000505583 SWAP70Q9UH65 585 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 MCM3APO60318 1980 aa7.06□□□□□ -1.28
GYPB-205ENST00000505583 ZBED9Q6R2W3 1325 aa7.05□□□□□ -1.28
GYPB-205ENST00000505583 UNC80Q8N2C7 3258 aa7.05□□□□□ -1.28
GYPB-205ENST00000505583 VWA5AO00534 786 aa7.05□□□□□ -1.28
GYPB-205ENST00000505583 WDR46O15213 610 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms