RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 C12orf42Q96LP6 360 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 TMOD4Q9NZQ9 345 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 EEF2P13639 858 aaKnown RBP19.93■□□□□ 0.78
SYNE4-207ENST00000505054 HOXA7P31268 230 aaPredicted RBP19.93■□□□□ 0.78
SYNE4-207ENST00000505054 TRIM32Q13049 653 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 MFSD6Q6ZSS7 791 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 C7orf61Q8IZ16 206 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 CEP95Q96GE4 821 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 ANO2Q9NQ90 1003 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 TOMM22Q9NS69 142 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 TMX2Q9Y320 296 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 RBM8AQ9Y5S9 174 aaKnown RBP19.93■□□□□ 0.78
SYNE4-207ENST00000505054 TAF6LQ9Y6J9 622 aa19.93■□□□□ 0.78
SYNE4-207ENST00000505054 RANBP6O60518 1105 aaKnown RBP19.92■□□□□ 0.78
SYNE4-207ENST00000505054 CYP21A2P08686 494 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 PCP11498 1178 aaKnown RBP19.92■□□□□ 0.78
SYNE4-207ENST00000505054 BMP8BP34820 402 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 USP14P54578 494 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 RRP12Q5JTH9 1297 aaKnown RBP19.92■□□□□ 0.78
SYNE4-207ENST00000505054 KIAA1755Q5JYT7 1200 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 KIAA1211Q6ZU35 1233 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 GDF15Q99988 308 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 RNF41Q9H4P4 317 aaPredicted RBP19.92■□□□□ 0.78
SYNE4-207ENST00000505054 ARHGEF10LQ9HCE6 1279 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 MTMR4Q9NYA4 1195 aa19.92■□□□□ 0.78
SYNE4-207ENST00000505054 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 HERVK_113P62684 666 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 ATP2B2Q01814 1243 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 MAP3K21Q5TCX8 1036 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 LRCH3Q96II8 777 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 NUDT12Q9BQG2 462 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 C11orf49Q9H6J7 331 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 IL17RBQ9NRM6 502 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 NYAP2Q9P242 653 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 OGDHLQ9ULD0 1010 aa19.91■□□□□ 0.78
SYNE4-207ENST00000505054 NMT2O60551 498 aa19.9■□□□□ 0.78
SYNE4-207ENST00000505054 XRCC5P13010 732 aaKnown RBP19.9■□□□□ 0.78
SYNE4-207ENST00000505054 PRKAR2AP13861 404 aaKnown RBP19.9■□□□□ 0.78
SYNE4-207ENST00000505054 VCAM1P19320 739 aa19.9■□□□□ 0.78
SYNE4-207ENST00000505054 CYP2B6P20813 491 aa19.9■□□□□ 0.78
SYNE4-207ENST00000505054 MNX1P50219 401 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-207ENST00000505054 TRMT44Q8IYL2 757 aaKnown RBP19.9■□□□□ 0.78
SYNE4-207ENST00000505054 GPRC5AQ8NFJ5 357 aa19.9■□□□□ 0.78
SYNE4-207ENST00000505054 GTF3C2Q8WUA4 911 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-207ENST00000505054 SH2D4AQ9H788 454 aa19.9■□□□□ 0.78
SYNE4-207ENST00000505054 COL6A3P12111 3177 aa19.9■□□□□ 0.78
SYNE4-207ENST00000505054 MAPK4P31152 587 aa19.89■□□□□ 0.77
SYNE4-207ENST00000505054 P2RX7Q99572 595 aaKnown RBP19.89■□□□□ 0.77
SYNE4-207ENST00000505054 VCPKMTQ9H867 229 aa19.89■□□□□ 0.77
SYNE4-207ENST00000505054 TXNRD2Q9NNW7 524 aa19.89■□□□□ 0.77
SYNE4-207ENST00000505054 ZMYND8Q9ULU4 1186 aaPredicted RBP19.89■□□□□ 0.77
SYNE4-207ENST00000505054 B4E1Z4 1266 aa19.88■□□□□ 0.77
SYNE4-207ENST00000505054 TTLL1O95922 423 aa19.88■□□□□ 0.77
SYNE4-207ENST00000505054 ZKSCAN1P17029 563 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-207ENST00000505054 NOVP48745 357 aa19.88■□□□□ 0.77
SYNE4-207ENST00000505054 STOX1Q6ZVD7 989 aa19.88■□□□□ 0.77
SYNE4-207ENST00000505054 ESR2Q92731 530 aa19.88■□□□□ 0.77
SYNE4-207ENST00000505054 CLIP2Q9UDT6 1046 aa19.88■□□□□ 0.77
SYNE4-207ENST00000505054 PFASO15067 1338 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 KDM4AO75164 1064 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 ERVK-9P63128 1117 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 ERVK-24P63145 666 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 NECTIN1Q15223 517 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 GPR153Q6NV75 609 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 SPICE1Q8N0Z3 855 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 LRRC47Q8N1G4 583 aaKnown RBP19.87■□□□□ 0.77
SYNE4-207ENST00000505054 LPAR1Q92633 364 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 MKL1Q969V6 931 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 TCP11L1Q9NUJ3 509 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
SYNE4-207ENST00000505054 SLC27A2O14975 620 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 PEX10O60683 326 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 NT5C2P49902 561 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 CREB3L3Q68CJ9 461 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 GPR142Q7Z601 462 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 SLC17A8Q8NDX2 589 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 APBA2Q99767 749 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 KRT23Q9C075 422 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 RPAP3Q9H6T3 665 aaPredicted RBP19.86■□□□□ 0.77
SYNE4-207ENST00000505054 CNNM2Q9H8M5 875 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 RBPJLQ9UBG7 517 aa19.86■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L15C9J2P7 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L13C9JLJ4 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L11C9JVI0 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L18D6R9N7 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L22D6RA61 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L17D6RBQ6 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L19D6RCP7 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L20D6RJB6 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 E7EWF7 191 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 SYN1P17600 705 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 RGS2P41220 211 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 MAGEA10P43363 369 aaPredicted RBP19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP17L24Q0WX57 530 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 CATSPERGQ6ZRH7 1159 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 CCAR1Q8IX12 1150 aaKnown RBP19.85■□□□□ 0.77
SYNE4-207ENST00000505054 USP6NLQ92738 828 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 PORCNQ9H237 461 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 GOPCQ9HD26 462 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms