RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 RGS2P41220 211 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 MTFR1Q15390 333 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 MORN1Q5T089 497 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 WDR78Q5VTH9 848 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 NKX2-3Q8TAU0 364 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 INCENPQ9NQS7 918 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 DOCK3Q8IZD9 2030 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 A0A0G2JMZ2 1700 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 RLFQ13129 1914 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 SLC15A5A6NIM6 579 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 ZNF213O14771 459 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 CCL5P13501 91 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 CYP2B6P20813 491 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 HAND2P61296 217 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 AKNAD1Q5T1N1 836 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 MFSD6Q6ZSS7 791 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 STAG1Q8WVM7 1258 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 USP6NLQ92738 828 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 MOV10L1Q9BXT6 1211 aaKnown RBP25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 RNF208Q9H0X6 261 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 CTNNA3Q9UI47 895 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 TACC3Q9Y6A5 838 aa25.05■■□□□ 1.6
TRAPPC11-203ENST00000504526 STRNO43815 780 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 GJB1P08034 283 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 EN2P19622 333 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 PTPREP23469 700 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 MAP2K5Q13163 448 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 RRP12Q5JTH9 1297 aaKnown RBP25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 SAMD1Q6SPF0 538 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 LRRC47Q8N1G4 583 aaKnown RBP25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 SLF1Q9BQI6 1058 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 MROH8Q9H579 483 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 FBXO28Q9NVF7 368 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 STX8Q9UNK0 236 aa25.04■■□□□ 1.6
TRAPPC11-203ENST00000504526 VWA5AO00534 786 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 SLC25A27O95847 323 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 CAPN2P17655 700 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 SLFN13Q68D06 897 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 PRPF38AQ8NAV1 312 aaKnown RBP25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 NUP88Q99567 741 aaPredicted RBP25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 APBA2Q99767 749 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 IL17RBQ9NRM6 502 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 TCP11L1Q9NUJ3 509 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 MYH4Q9Y623 1939 aa25.03■■□□□ 1.6
TRAPPC11-203ENST00000504526 PLXNB2O15031 1838 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 KIAA0100Q14667 2235 aaKnown RBP25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 CHMLP26374 656 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 COPB2P35606 906 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 NOVP48745 357 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 GRB14Q14449 540 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 PLS1Q14651 629 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 IMMTQ16891 758 aaKnown RBP25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 FEM1BQ9UK73 627 aa25.02■■□□□ 1.6
TRAPPC11-203ENST00000504526 PARP14Q460N5 1801 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 BMP3P12645 472 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 ZKSCAN1P17029 563 aaPredicted RBP25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 ERCC3P19447 782 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 TMEM132BQ14DG7 1078 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 TRIB2Q92519 343 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 GMCL1Q96IK5 515 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 UNC93B1Q9H1C4 597 aa25.01■■□□□ 1.59
TRAPPC11-203ENST00000504526 HOXC6P09630 235 aa25■■□□□ 1.59
TRAPPC11-203ENST00000504526 GJA8P48165 433 aa25■■□□□ 1.59
TRAPPC11-203ENST00000504526 TBC1D10CQ8IV04 446 aa25■■□□□ 1.59
TRAPPC11-203ENST00000504526 ABRAQ8N0Z2 381 aa25■■□□□ 1.59
TRAPPC11-203ENST00000504526 ESR2Q92731 530 aa25■■□□□ 1.59
TRAPPC11-203ENST00000504526 NBPF3Q9H094 633 aa25■■□□□ 1.59
TRAPPC11-203ENST00000504526 NMT2O60551 498 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 FDX1P10109 184 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 STAT3P40763 770 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 NCAPG2Q86XI2 1143 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 RIOX2Q8IUF8 465 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 RPTORQ8N122 1335 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 REPS2Q8NFH8 660 aa24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 CTDP1Q9Y5B0 961 aaPredicted RBP24.99■■□□□ 1.59
TRAPPC11-203ENST00000504526 ZBED4O75132 1171 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 NEFLP07196 543 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 SLC1A4P43007 532 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 FAM160B2Q86V87 743 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 CHURC1Q8WUH1 139 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 TTC14Q96N46 770 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 IL25Q9H293 177 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 HMX1Q9NP08 348 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 PAK6Q9NQU5 681 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 SLC5A4Q9NY91 659 aa24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 ZNF214Q9UL59 606 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC11-203ENST00000504526 ATP2A1O14983 1001 aa24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 TOP1P11387 765 aaKnown RBP24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 CCDC178Q5BJE1 867 aa24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 U2AF1L4Q8WU68 220 aaKnown RBP24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 TEX13BQ9BXU2 312 aa24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 LAMA4Q16363 1823 aa24.97■■□□□ 1.59
TRAPPC11-203ENST00000504526 ZNF236Q9UL36 1845 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 NEDD4P46934 1319 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 PLA2G6O60733 806 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 SGPL1O95470 568 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 FCER1AP12319 257 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 MCCP23508 829 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 ADORA2AP29274 412 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms