RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 ZNF609O15014 1411 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 KCNJ18B7U540 433 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 CXCR5P32302 372 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 IL15P40933 162 aaPredicted RBP9.62□□□□□ -0.87
CCDC149-204ENST00000504487 SATB1Q01826 763 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 TBC1D8BQ0IIM8 1120 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 KCNJ12Q14500 433 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 LRRC24Q50LG9 513 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 CCDC178Q5BJE1 867 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 EPHA10Q5JZY3 1008 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 CACNA2D4Q7Z3S7 1137 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 RPGRQ92834 1020 aaKnown RBP9.62□□□□□ -0.87
CCDC149-204ENST00000504487 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 PUS3Q9BZE2 481 aaKnown RBP9.62□□□□□ -0.87
CCDC149-204ENST00000504487 LUC7LQ9NQ29 371 aaKnown RBP9.62□□□□□ -0.87
CCDC149-204ENST00000504487 COPRSQ9NQ92 184 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
CCDC149-204ENST00000504487 C1orf167Q5SNV9 1468 aa9.62□□□□□ -0.87
CCDC149-204ENST00000504487 GPAA1O43292 621 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 TBX2Q13207 712 aaPredicted RBP9.61□□□□□ -0.87
CCDC149-204ENST00000504487 IFT20Q8IY31 132 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 MICAL1Q8TDZ2 1067 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CHP1Q99653 195 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CSRNP2Q9H175 543 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 SH3TC1Q8TE82 1336 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
CCDC149-204ENST00000504487 EPHB4P54760 987 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CYP27A1Q02318 531 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 MORC3Q14149 939 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 ZNF174Q15697 407 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CAVIN4Q5BKX8 364 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CCNI2Q6ZMN8 369 aaPredicted RBP9.61□□□□□ -0.87
CCDC149-204ENST00000504487 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CMTR1Q8N1G2 835 aaKnown RBP9.61□□□□□ -0.87
CCDC149-204ENST00000504487 NELFBQ8WX92 580 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 CCDC113Q9H0I3 377 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 RIMS1Q86UR5 1692 aaKnown RBP9.61□□□□□ -0.87
CCDC149-204ENST00000504487 ZNF185O15231 689 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 MARCH6O60337 910 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 KRT31Q15323 416 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 KAT2BQ92831 832 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 RMND1Q9NWS8 449 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 TFR2Q9UP52 801 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
CCDC149-204ENST00000504487 M0R2C6 588 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 SLC5A1P13866 664 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 GUCY1A3Q02108 690 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 PTPN12Q05209 780 aaKnown RBP9.6□□□□□ -0.87
CCDC149-204ENST00000504487 BIRC2Q13490 618 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 PPP1R7Q15435 360 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 OSBP2Q969R2 916 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 NLRP3Q96P20 1036 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 RICTORQ6R327 1708 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 LOC102724428A0A0B4J2F2 783 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 PSMA7O14818 248 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 CPP00450 1065 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 SIK1P57059 783 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 PAK2Q13177 524 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 WTAPQ15007 396 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 MMRN2Q9H8L6 949 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 RANBP6O60518 1105 aaKnown RBP9.6□□□□□ -0.87
CCDC149-204ENST00000504487 GYPCP04921 128 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 NR1D1P20393 614 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
CCDC149-204ENST00000504487 NR5A1Q13285 461 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 APOA5Q6Q788 366 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 ANKRD13CQ8N6S4 541 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 NACAP1Q9BZK3 213 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 PCDHB6Q9Y5E3 794 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 NEURL4Q96JN8 1562 aa9.6□□□□□ -0.87
CCDC149-204ENST00000504487 PPP1R12BO60237 982 aaPredicted RBP9.59□□□□□ -0.87
CCDC149-204ENST00000504487 SLC8A1P32418 973 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 APPBP2Q92624 585 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 ADD3Q9UEY8 706 aaKnown RBP9.59□□□□□ -0.87
CCDC149-204ENST00000504487 CDC42BPGQ6DT37 1551 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 ERVV-2B6SEH9 535 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 TRIM37O94972 964 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 ABL1P00519 1130 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 STAT6P42226 847 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 PPARAQ07869 468 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 CCDC152Q4G0S7 254 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 ALS2CLQ60I27 953 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 MFSD6Q6ZSS7 791 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 CACNA2D3Q8IZS8 1091 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 CNPY4Q8N129 248 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 TRIM58Q8NG06 486 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 EPSTI1Q96J88 318 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 IFIH1Q9BYX4 1025 aaKnown RBP9.59□□□□□ -0.87
CCDC149-204ENST00000504487 TSGA10Q9BZW7 698 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 HSD3B7Q9H2F3 369 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 RBM28Q9NW13 759 aaKnown RBP9.59□□□□□ -0.87
CCDC149-204ENST00000504487 TARSL2A2RTX5 802 aaKnown RBP9.59□□□□□ -0.87
CCDC149-204ENST00000504487 GCOM1H8Y6P7 765 aaPredicted RBP9.59□□□□□ -0.87
CCDC149-204ENST00000504487 CLSTN1O94985 981 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 KRT14P02533 472 aa9.59□□□□□ -0.87
CCDC149-204ENST00000504487 CLTAP09496 248 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms