RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 ZNF213O14771 459 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 SLC25A27O95847 323 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 GJB1P08034 283 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 ZKSCAN1P17029 563 aaPredicted RBP21.2■□□□□ 0.98
NFKB1-204ENST00000504044 PDE4AP27815 886 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 MFSD6Q6ZSS7 791 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 ATG4CQ96DT6 458 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 DSCC1Q9BVC3 393 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 PPP1R9AQ9ULJ8 1098 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 ISY1Q9ULR0 285 aaKnown RBP21.2■□□□□ 0.98
NFKB1-204ENST00000504044 RAD50Q92878 1312 aa21.2■□□□□ 0.98
NFKB1-204ENST00000504044 NDUFB10O96000 172 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 MAP2K5Q13163 448 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 MTFR1Q15390 333 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 RRP12Q5JTH9 1297 aaKnown RBP21.19■□□□□ 0.98
NFKB1-204ENST00000504044 KIAA1755Q5JYT7 1200 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
NFKB1-204ENST00000504044 PRPF38AQ8NAV1 312 aaKnown RBP21.19■□□□□ 0.98
NFKB1-204ENST00000504044 SLF1Q9BQI6 1058 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 FEM1BQ9UK73 627 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 ZSWIM8A7E2V4 1837 aa21.19■□□□□ 0.98
NFKB1-204ENST00000504044 PEX10O60683 326 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 NEFLP07196 543 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 EN2P19622 333 aaPredicted RBP21.18■□□□□ 0.98
NFKB1-204ENST00000504044 PTPREP23469 700 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 IMMTQ16891 758 aaKnown RBP21.18■□□□□ 0.98
NFKB1-204ENST00000504044 MORN1Q5T089 497 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 AKNAD1Q5T1N1 836 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 SLFN13Q68D06 897 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 NCAPG2Q86XI2 1143 aa21.18■□□□□ 0.98
NFKB1-204ENST00000504044 MOV10L1Q9BXT6 1211 aaKnown RBP21.18■□□□□ 0.98
NFKB1-204ENST00000504044 HMX1Q9NP08 348 aaPredicted RBP21.18■□□□□ 0.98
NFKB1-204ENST00000504044 ZBED4O75132 1171 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 FGRP09769 529 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 FDX1P10109 184 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 GJA8P48165 433 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 CCDC178Q5BJE1 867 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 LRRC47Q8N1G4 583 aaKnown RBP21.17■□□□□ 0.98
NFKB1-204ENST00000504044 STAG1Q8WVM7 1258 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 ESR2Q92731 530 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 MGAMO43451 1857 aa21.17■□□□□ 0.98
NFKB1-204ENST00000504044 RPTORQ8N122 1335 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 VWA5AO00534 786 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 BMP3P12645 472 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 GSPT1P15170 499 aaKnown RBP21.16■□□□□ 0.98
NFKB1-204ENST00000504044 ERCC3P19447 782 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 SLC1A4P43007 532 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 HAND2P61296 217 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 IKQ13123 557 aaPredicted RBP21.16■□□□□ 0.98
NFKB1-204ENST00000504044 GRB14Q14449 540 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 MFSD14CQ5VZR4 134 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 DPP9Q86TI2 863 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 ABRAQ8N0Z2 381 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 CHURC1Q8WUH1 139 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 GMCL1Q96IK5 515 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 UNC93B1Q9H1C4 597 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 ADAMTS5Q9UNA0 930 aa21.16■□□□□ 0.98
NFKB1-204ENST00000504044 STAT3P40763 770 aa21.15■□□□□ 0.98
NFKB1-204ENST00000504044 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
NFKB1-204ENST00000504044 FAM160B2Q86V87 743 aa21.15■□□□□ 0.98
NFKB1-204ENST00000504044 U2AF1L4Q8WU68 220 aaKnown RBP21.15■□□□□ 0.98
NFKB1-204ENST00000504044 USP6NLQ92738 828 aa21.15■□□□□ 0.98
NFKB1-204ENST00000504044 TCP11L1Q9NUJ3 509 aa21.15■□□□□ 0.98
NFKB1-204ENST00000504044 SGPL1O95470 568 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 FCER1AP12319 257 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 STAT2P52630 851 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 RIOX2Q8IUF8 465 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 TRIB2Q92519 343 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 NUP88Q99567 741 aaPredicted RBP21.14■□□□□ 0.97
NFKB1-204ENST00000504044 TEX13BQ9BXU2 312 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.14■□□□□ 0.97
NFKB1-204ENST00000504044 FBXO28Q9NVF7 368 aa21.14■□□□□ 0.97
NFKB1-204ENST00000504044 TFRCP02786 760 aaKnown RBP21.13■□□□□ 0.97
NFKB1-204ENST00000504044 HOXC6P09630 235 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 KCTD2Q14681 263 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 TMEM132BQ14DG7 1078 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 IQCA1Q86XH1 822 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 KIFC2Q96AC6 838 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 TTC14Q96N46 770 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 CNNM2Q9H8M5 875 aa21.13■□□□□ 0.97
NFKB1-204ENST00000504044 PAK6Q9NQU5 681 aaPredicted RBP21.13■□□□□ 0.97
NFKB1-204ENST00000504044 GREB1LQ9C091 1923 aaPredicted RBP21.12■□□□□ 0.97
NFKB1-204ENST00000504044 TOP1P11387 765 aaKnown RBP21.12■□□□□ 0.97
NFKB1-204ENST00000504044 PRKAR2AP13861 404 aaKnown RBP21.12■□□□□ 0.97
NFKB1-204ENST00000504044 ADORA2AP29274 412 aa21.12■□□□□ 0.97
NFKB1-204ENST00000504044 OAZ1P54368 228 aa21.12■□□□□ 0.97
NFKB1-204ENST00000504044 DCAF4Q8WV16 495 aa21.12■□□□□ 0.97
NFKB1-204ENST00000504044 DEFB118Q96PH6 123 aa21.12■□□□□ 0.97
NFKB1-204ENST00000504044 KRT23Q9C075 422 aa21.12■□□□□ 0.97
NFKB1-204ENST00000504044 TMEM232C9JQI7 657 aa21.11■□□□□ 0.97
NFKB1-204ENST00000504044 CHMLP26374 656 aa21.11■□□□□ 0.97
NFKB1-204ENST00000504044 MMP19Q99542 508 aa21.11■□□□□ 0.97
NFKB1-204ENST00000504044 INCENPQ9NQS7 918 aa21.11■□□□□ 0.97
NFKB1-204ENST00000504044 IL17RBQ9NRM6 502 aa21.11■□□□□ 0.97
NFKB1-204ENST00000504044 FBXO40Q9UH90 709 aa21.11■□□□□ 0.97
NFKB1-204ENST00000504044 RBBP6Q7Z6E9 1792 aaKnown RBP21.1■□□□□ 0.97
NFKB1-204ENST00000504044 ATP2A1O14983 1001 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 PLA2G6O60733 806 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 MCCP23508 829 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 TRDNQ13061 729 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms