RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 IFIT1BQ5T764 474 aaKnown RBP19.37■□□□□ 0.69
SCLT1-205ENST00000503401 NEK1Q96PY6 1258 aa19.37■□□□□ 0.69
SCLT1-205ENST00000503401 COL11A1P12107 1806 aaPredicted RBP19.37■□□□□ 0.69
SCLT1-205ENST00000503401 SPDYE16A6NNV3 312 aaPredicted RBP19.36■□□□□ 0.69
SCLT1-205ENST00000503401 BCRP11274 1271 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 CPA1P15085 419 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 MCM5P33992 734 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 SLC1A4P43007 532 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 CAP1Q01518 475 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 SP3Q02447 781 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 CCDC178Q5BJE1 867 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 KCTD1Q719H9 257 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 TCEANC2Q96MN5 208 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 PAGR1Q9BTK6 254 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 KAT14Q9H8E8 782 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 TXNRD2Q9NNW7 524 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 EPB41L2O43491 1005 aaKnown RBP19.36■□□□□ 0.69
SCLT1-205ENST00000503401 FKTNO75072 461 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 BMP3P12645 472 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 KRT32Q14532 448 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 COG2Q14746 738 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 TMEM67Q5HYA8 995 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 PNMA1Q8ND90 353 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 ANKS1AQ92625 1134 aa19.36■□□□□ 0.69
SCLT1-205ENST00000503401 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
SCLT1-205ENST00000503401 FRMPD2Q68DX3 1309 aaPredicted RBP19.35■□□□□ 0.69
SCLT1-205ENST00000503401 ERICH2A1L162 156 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 WTAPQ15007 396 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 SART3Q15020 963 aaKnown RBP19.35■□□□□ 0.69
SCLT1-205ENST00000503401 CCDC96Q2M329 555 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 CD99L2Q8TCZ2 262 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 IGDCC4Q8TDY8 1250 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 ATG4CQ96DT6 458 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 GMCL1Q96IK5 515 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 ARHGAP39Q9C0H5 1083 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
SCLT1-205ENST00000503401 TMEM232C9JQI7 657 aa19.34■□□□□ 0.69
SCLT1-205ENST00000503401 PDHBP11177 359 aa19.34■□□□□ 0.69
SCLT1-205ENST00000503401 DSG3P32926 999 aa19.34■□□□□ 0.69
SCLT1-205ENST00000503401 GCLCP48506 637 aaPredicted RBP19.34■□□□□ 0.69
SCLT1-205ENST00000503401 NOM1Q5C9Z4 860 aaKnown RBP19.34■□□□□ 0.69
SCLT1-205ENST00000503401 DOCK3Q8IZD9 2030 aa19.34■□□□□ 0.69
SCLT1-205ENST00000503401 MGAMO43451 1857 aa19.34■□□□□ 0.69
SCLT1-205ENST00000503401 FAM110CQ1W6H9 321 aa19.33■□□□□ 0.69
SCLT1-205ENST00000503401 DCAF4Q8WV16 495 aa19.33■□□□□ 0.69
SCLT1-205ENST00000503401 LY9Q9HBG7 655 aa19.33■□□□□ 0.69
SCLT1-205ENST00000503401 HOXC10Q9NYD6 342 aa19.33■□□□□ 0.69
SCLT1-205ENST00000503401 BTBD7Q9P203 1132 aa19.33■□□□□ 0.69
SCLT1-205ENST00000503401 PPP1R9AQ9ULJ8 1098 aa19.33■□□□□ 0.69
SCLT1-205ENST00000503401 A0A0G2JMZ2 1700 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 CNMDO75829 334 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 GOLGA8HP0CJ92 632 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 CTGFP29279 349 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 LACTBP83111 547 aaPredicted RBP19.33■□□□□ 0.68
SCLT1-205ENST00000503401 IKQ13123 557 aaPredicted RBP19.33■□□□□ 0.68
SCLT1-205ENST00000503401 Q3C1V9 767 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 TTBK2Q6IQ55 1244 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
SCLT1-205ENST00000503401 KIFC2Q96AC6 838 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 SLF1Q9BQI6 1058 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 GPCPD1Q9NPB8 672 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 PRDM10Q9NQV6 1147 aa19.33■□□□□ 0.68
SCLT1-205ENST00000503401 SH2B2O14492 632 aaPredicted RBP19.32■□□□□ 0.68
SCLT1-205ENST00000503401 CASTP20810 708 aaKnown RBP19.32■□□□□ 0.68
SCLT1-205ENST00000503401 EXOSC10Q01780 885 aaKnown RBP19.32■□□□□ 0.68
SCLT1-205ENST00000503401 FEM1BQ9UK73 627 aa19.32■□□□□ 0.68
SCLT1-205ENST00000503401 SNHG28P0DPA3 235 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 SLC16A2P36021 539 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 STAT2P52630 851 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 ERVK-9P63128 1117 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 ERVK-24P63145 666 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 ZNF543Q08ER8 600 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 LBX2Q6XYB7 198 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 GPRC5AQ8NFJ5 357 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 TMEM87BQ96K49 555 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 MORF4L1Q9UBU8 362 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
SCLT1-205ENST00000503401 VWA5AO00534 786 aa19.3■□□□□ 0.68
SCLT1-205ENST00000503401 BLOC1S2Q6QNY1 142 aa19.3■□□□□ 0.68
SCLT1-205ENST00000503401 PRPF38AQ8NAV1 312 aaKnown RBP19.3■□□□□ 0.68
SCLT1-205ENST00000503401 GTF3C2Q8WUA4 911 aaPredicted RBP19.3■□□□□ 0.68
SCLT1-205ENST00000503401 ERO1AQ96HE7 468 aa19.3■□□□□ 0.68
SCLT1-205ENST00000503401 MYL10Q9BUA6 226 aa19.3■□□□□ 0.68
SCLT1-205ENST00000503401 CPVLQ9H3G5 476 aa19.3■□□□□ 0.68
SCLT1-205ENST00000503401 MYPNQ86TC9 1320 aa19.3■□□□□ 0.68
SCLT1-205ENST00000503401 HMGB1P09429 215 aaKnown RBP19.29■□□□□ 0.68
SCLT1-205ENST00000503401 PSMC4P43686 418 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 SNAP25P60880 206 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 PLS1Q14651 629 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 NFXL1Q6ZNB6 911 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 ADAMTS5Q9UNA0 930 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 EIF5BO60841 1220 aaKnown RBP19.29■□□□□ 0.68
SCLT1-205ENST00000503401 RPS6KB1P23443 525 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 PSMA5P28066 241 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 KIF22Q14807 665 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 TMEM132BQ14DG7 1078 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 RAB11FIP4Q86YS3 637 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 CHURC1Q8WUH1 139 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 NUP133Q8WUM0 1156 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 TRIM47Q96LD4 638 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms