RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 ST3GAL2Q16842 350 aa9.4□□□□□ -0.9
CRNDE-202ENST00000502066 IER5Q5VY09 327 aa9.4□□□□□ -0.9
CRNDE-202ENST00000502066 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.9
CRNDE-202ENST00000502066 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.9
CRNDE-202ENST00000502066 CDHR2Q9BYE9 1310 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 SSC5DA1L4H1 1573 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-202ENST00000502066 ALX3O95076 343 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 SGPL1O95470 568 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 EGFRP00533 1210 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 TFRCP02786 760 aaKnown RBP9.39□□□□□ -0.91
CRNDE-202ENST00000502066 IDH3AP50213 366 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 KCNQ1P51787 676 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
CRNDE-202ENST00000502066 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
CRNDE-202ENST00000502066 ZFHX2Q9C0A1 2572 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-202ENST00000502066 ZSWIM8A7E2V4 1837 aa9.38□□□□□ -0.91
CRNDE-202ENST00000502066 INPP5BP32019 993 aa9.38□□□□□ -0.91
CRNDE-202ENST00000502066 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
CRNDE-202ENST00000502066 SMG9Q9H0W8 520 aaKnown RBP9.38□□□□□ -0.91
CRNDE-202ENST00000502066 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
CRNDE-202ENST00000502066 USP20Q9Y2K6 914 aa9.38□□□□□ -0.91
CRNDE-202ENST00000502066 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
CRNDE-202ENST00000502066 PTCD1O75127 700 aaKnown RBP9.37□□□□□ -0.91
CRNDE-202ENST00000502066 MAP3K6O95382 1288 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 NPR1P16066 1061 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 INHBEP58166 350 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 TCIRG1Q13488 830 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 TBC1D9BQ66K14 1250 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 IGF2-ASQ6U949 168 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 NECAB2Q7Z6G3 386 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 DTWD1Q8N5C7 304 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
CRNDE-202ENST00000502066 ANKS1AQ92625 1134 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 FRRS1LQ9P0K9 344 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 SNED1Q8TER0 1413 aa9.37□□□□□ -0.91
CRNDE-202ENST00000502066 SOS1Q07889 1333 aaPredicted RBP9.36□□□□□ -0.91
CRNDE-202ENST00000502066 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
CRNDE-202ENST00000502066 RARAP10276 462 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 TFF2Q03403 129 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 PRR23CQ6ZRP0 262 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 CNBD1Q8NA66 436 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
CRNDE-202ENST00000502066 KIF24Q5T7B8 1368 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 ACACBO00763 2458 aa9.36□□□□□ -0.91
CRNDE-202ENST00000502066 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 RAD17O75943 681 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 EPB42P16452 691 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 SSTR4P31391 388 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 ST5P78524 1137 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 PCSK7Q16549 785 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.35□□□□□ -0.91
CRNDE-202ENST00000502066 KRTAP9-9Q9BYP9 154 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 KRTAP9-4Q9BYQ2 154 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 ARHGAP39Q9C0H5 1083 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 GGA3Q9NZ52 723 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 ZNRF3Q9ULT6 936 aa9.35□□□□□ -0.91
CRNDE-202ENST00000502066 ASTN2O75129 1339 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-202ENST00000502066 J3QW42 95 aa9.34□□□□□ -0.91
CRNDE-202ENST00000502066 DPYDQ12882 1025 aa9.34□□□□□ -0.91
CRNDE-202ENST00000502066 AOC3Q16853 763 aa9.34□□□□□ -0.91
CRNDE-202ENST00000502066 CRTC2Q53ET0 693 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-202ENST00000502066 PCMTD2Q9NV79 361 aa9.34□□□□□ -0.91
CRNDE-202ENST00000502066 CXXC1Q9P0U4 656 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-202ENST00000502066 COL15A1P39059 1388 aa9.34□□□□□ -0.91
CRNDE-202ENST00000502066 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 MICAL2O94851 1124 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
CRNDE-202ENST00000502066 HOXC9P31274 260 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 GRK4P32298 578 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
CRNDE-202ENST00000502066 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
CRNDE-202ENST00000502066 AKNAD1Q5T1N1 836 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 NME9Q86XW9 330 aa9.33□□□□□ -0.92
CRNDE-202ENST00000502066 MAFBQ9Y5Q3 323 aaPredicted RBP9.33□□□□□ -0.92
CRNDE-202ENST00000502066 MAP1BP46821 2468 aaKnown RBP9.32□□□□□ -0.92
CRNDE-202ENST00000502066 FAM208BQ5VWN6 2430 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 NCOR2Q9Y618 2525 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 PRAMEF22A3QJZ6 481 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 ARSDP51689 593 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 GPLD1P80108 840 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 PRKG1Q13976 671 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 TNIP1Q15025 636 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 OTUD7BQ6GQQ9 843 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 GDF6Q6KF10 455 aaPredicted RBP9.32□□□□□ -0.92
CRNDE-202ENST00000502066 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
CRNDE-202ENST00000502066 XIRP2A4UGR9 3374 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 TAF1P21675 1872 aa9.32□□□□□ -0.92
CRNDE-202ENST00000502066 ASH1LQ9NR48 2969 aaKnown RBP9.31□□□□□ -0.92
CRNDE-202ENST00000502066 FSTP19883 344 aa9.31□□□□□ -0.92
CRNDE-202ENST00000502066 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CRNDE-202ENST00000502066 UBXN2AP68543 259 aa9.31□□□□□ -0.92
CRNDE-202ENST00000502066 SHHQ15465 462 aa9.31□□□□□ -0.92
CRNDE-202ENST00000502066 AAK1Q2M2I8 961 aa9.31□□□□□ -0.92
CRNDE-202ENST00000502066 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
CRNDE-202ENST00000502066 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms