RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ARHGEF28Q8N1W1 1705 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 TRIM75PA6NK02 468 aa11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 ZAP70P43403 619 aa11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 KRT83P78385 493 aa11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 RSRC1Q96IZ7 334 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 LMTK2Q8IWU2 1503 aa11.86□□□□□ -0.51
TRAPPC12-223ENST00000497597 A0A0G2JS52 829 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 ANTXR2P58335 489 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 EGFL6Q8IUX8 553 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 KSR1Q8IVT5 923 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 MS4A14Q96JA4 679 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 YIPF3Q9GZM5 350 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 VIPAS39Q9H9C1 493 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 SALL1Q9NSC2 1324 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 TMOD1P28289 359 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 TBC1D8BQ0IIM8 1120 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 PAK1Q13153 545 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 NLRP14Q86W24 1093 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 FAM167BQ9BTA0 163 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 TRIM31Q9BZY9 425 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 GGT7Q9UJ14 662 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 C3P01024 1663 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 KDRP35968 1356 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 MINDY4BA8MYZ0 360 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 B4DLN1 442 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 TTMPQ5BVD1 217 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 CYB5R4Q7L1T6 521 aa11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 DDX21Q9NR30 783 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 FAM207AQ9NSI2 230 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC12-223ENST00000497597 RIMS1Q86UR5 1692 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 CSB-PGBD3P0DP91 1061 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 TOM1L2Q6ZVM7 507 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 TRAPPC11Q7Z392 1133 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 ZBTB10Q96DT7 871 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 CPSF2Q9P2I0 782 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 MCM7P33993 719 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 CARSP49589 748 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 KLK7P49862 253 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 RTN1Q16799 776 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 EHBP1Q8NDI1 1231 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 SELENOSQ9BQE4 189 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 KIF9Q9HAQ2 790 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 ZNF142P52746 1687 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC12-223ENST00000497597 IRF6O14896 467 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 TBC1D1Q86TI0 1168 aaPredicted RBP11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 AMOTL1Q8IY63 956 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 UHMK1Q8TAS1 419 aaKnown RBP11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 NAPBQ9H115 298 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 CEP131Q9UPN4 1083 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 SLC4A4Q9Y6R1 1079 aa11.83□□□□□ -0.51
TRAPPC12-223ENST00000497597 EME2A4GXA9 379 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 AP1ARQ63HQ0 302 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 TRIM68Q6AZZ1 485 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 CCDC51Q96ER9 411 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 KRT12Q99456 494 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 STK38LQ9Y2H1 464 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 PPP1R37O75864 691 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 CCNHP51946 323 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 DPYDQ12882 1025 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 SLC4A8Q2Y0W8 1093 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 FAM133BQ5BKY9 247 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 TMC4Q7Z404 712 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
TRAPPC12-223ENST00000497597 RCCD1A6NED2 376 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 PTPREP23469 700 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 AMPD2Q01433 879 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 SPAG1Q07617 926 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 RILPL1Q5EBL4 403 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 CYB5D1Q6P9G0 228 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 SPATA4Q8NEY3 305 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 ALS2CR12Q96Q35 445 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 PACSIN2Q9UNF0 486 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 PLEKP08567 350 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms