RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RCCD1A6NED2 376 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 CCNHP51946 323 aaPredicted RBP14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 ODF2Q5BJF6 829 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 CYB5D1Q6P9G0 228 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 RANBP6O60518 1105 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 TRIM21P19474 475 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 PTPREP23469 700 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 C8orf74Q6P047 294 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 ZKSCAN3Q9BRR0 538 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 NFU1Q9UMS0 254 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 hCG_1642624A0A1W2PR95 340 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 ZSCAN5CA6NGD5 496 aaPredicted RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 TOB1P50616 345 aaPredicted RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 SMTNP53814 917 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 TMEM67Q5HYA8 995 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 KANK3Q6NY19 840 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 NFRKBQ6P4R8 1299 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 APOA5Q6Q788 366 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 CYB5R4Q7L1T6 521 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 KRT26Q7Z3Y9 468 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 MYCBPAPQ8TBZ2 947 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 THOC1Q96FV9 657 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 PUS7LQ9H0K6 701 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 EPN3Q9H201 632 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 ZNHIT6Q9NWK9 470 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 PHF8Q9UPP1 1060 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 TNRQ92752 1358 aa14.6□□□□□ -0.07
GAPVD1-220ENST00000497580 A0A087X0B3 334 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 PPP1R37O75864 691 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 TPX2Q9ULW0 747 aaKnown RBP14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 KIF5AQ12840 1032 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 A1CFQ9NQ94 594 aaKnown RBP14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 DDX21Q9NR30 783 aaKnown RBP eCLIP14.59□□□□□ -0.073e-6■□□□□ 8.6
GAPVD1-220ENST00000497580 UBN2Q6ZU65 1347 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 ENO4A6NNW6 628 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 NCK2O43639 380 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 EPHB4P54760 987 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 PAGE5Q96GU1 130 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 MLXIPQ9HAP2 919 aa14.59□□□□□ -0.07
GAPVD1-220ENST00000497580 TRIM49BA6NDI0 452 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 VAV2P52735 878 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 KRT83P78385 493 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 CUL4BQ13620 913 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 PTGISQ16647 500 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 SPRED3Q2MJR0 410 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 LRRC24Q50LG9 513 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 CDKAL1Q5VV42 579 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 NELFBQ8WX92 580 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 UBAC1Q9BSL1 405 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 ZBTB3Q9H5J0 574 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 USP31Q70CQ4 1352 aa14.58□□□□□ -0.07
GAPVD1-220ENST00000497580 RNMTO43148 476 aaKnown RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 PAPD7Q5XG87 772 aaKnown RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM43BQ6ZT52 329 aaPredicted RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 EHBP1Q8NDI1 1231 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 RASSF8Q8NHQ8 419 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 SYMPKQ92797 1274 aaKnown RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 GPAA1O43292 621 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 BUB1BO60566 1050 aaPredicted RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 CYLC1P35663 651 aaPredicted RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 RFX5P48382 616 aaPredicted RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 SPATA4Q8NEY3 305 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 SPDL1Q96EA4 605 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 CALR3Q96L12 384 aaKnown RBP14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 KIF9Q9HAQ2 790 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 MYH8P13535 1937 aa14.58□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM237AA0A1B0GTK4 181 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 ANKRD18BA2A2Z9 1011 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 IFIT3O14879 490 aaKnown RBP14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 MOCS3O95396 460 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM153BP0C7A2 387 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 GUCY2DQ02846 1103 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 MYO1EQ12965 1108 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 HLTFQ14527 1009 aaKnown RBP eCLIP14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM153CQ494X1 144 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 ACCSLQ4AC99 568 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 MSL1Q68DK7 614 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 PNMA8AQ86V59 439 aaPredicted RBP14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 GOLGA6L10A6NI86 522 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 PPP1R3GB7ZBB8 358 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 PAFAH1B1P43034 410 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 ANKRD13DQ6ZTN6 518 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 SPATS2Q86XZ4 545 aaKnown RBP14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 XAGE2Q96GT9 111 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 GDAQ9Y2T3 454 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 CARSP49589 748 aaKnown RBP14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 PAK1Q13153 545 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 SPA17Q15506 151 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 TBC1D10CQ8IV04 446 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms