RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 NAP1L4Q99733 375 aaKnown RBP9.97□□□□□ -0.81
U2AF1-212ENST00000496462 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-212ENST00000496462 ZSWIM5Q9P217 1185 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 TMX2Q9Y320 296 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 RASSF10A6NK89 507 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 SHMT1P34896 483 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 NLRP5P59047 1200 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 BRDTQ58F21 947 aaPredicted RBP9.96□□□□□ -0.81
U2AF1-212ENST00000496462 MCTP1Q6DN14 999 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 TATDN1Q6P1N9 297 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 NCAPG2Q86XI2 1143 aa9.96□□□□□ -0.81
U2AF1-212ENST00000496462 KLRF2D3W0D1 207 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 FBXO11Q86XK2 927 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 TMEM47Q9BQJ4 181 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 AMNQ9BXJ7 453 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 ADD3Q9UEY8 706 aaKnown RBP9.96□□□□□ -0.82
U2AF1-212ENST00000496462 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 SPDYE3A6NKU9 549 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 NAPAP54920 295 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 ANKRD23Q86SG2 305 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 DPP9Q86TI2 863 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 ZFPM1Q8IX07 1006 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 SPICE1Q8N0Z3 855 aa9.96□□□□□ -0.82
U2AF1-212ENST00000496462 ZNF274Q96GC6 653 aaPredicted RBP9.96□□□□□ -0.82
U2AF1-212ENST00000496462 LRRC37AA6NMS7 1700 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 FCGRTP55899 365 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 KIF23Q02241 960 aaPredicted RBP9.95□□□□□ -0.82
U2AF1-212ENST00000496462 TBC1D10CQ8IV04 446 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 ANKRD35Q8N283 1001 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 GPRC5AQ8NFJ5 357 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 SLC26A6Q9BXS9 759 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 CCPG1Q9ULG6 757 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 AGTPBP1Q9UPW5 1226 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 SCN9AQ15858 1988 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 CHST3Q7LGC8 479 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 JMYQ8N9B5 988 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 PIBF1Q8WXW3 757 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 LRRC2Q9BYS8 371 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 ZNF112Q9UJU3 913 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 LTBP1Q14766 1721 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 LBX1P52954 281 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 HEATR3Q7Z4Q2 680 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 TNS4Q8IZW8 715 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 FANCBQ8NB91 859 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 MAP3K14Q99558 947 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 SPC25Q9HBM1 224 aa9.95□□□□□ -0.82
U2AF1-212ENST00000496462 ORC3Q9UBD5 711 aaPredicted RBP9.95□□□□□ -0.82
U2AF1-212ENST00000496462 MYPNQ86TC9 1320 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 TNPO2O14787 897 aaKnown RBP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 FAM83BQ5T0W9 1011 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 GMCL1P1Q8NEA9 526 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 AK9Q5TCS8 1911 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 SH2B2O14492 632 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 FOXN1O15353 648 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 DEXIO95424 95 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 ALAS1P13196 640 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 CCT2P78371 535 aaKnown RBP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 LDLRAD1Q5T700 205 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 NSMFQ6X4W1 530 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 CCDC82Q8N4S0 544 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 CCDC43Q96MW1 224 aaKnown RBP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 RABGAP1Q9Y3P9 1069 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 PDHXO00330 501 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 MAPK4P31152 587 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 APOBRQ0VD83 1088 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 COL13A1Q5TAT6 717 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 CCDC174Q6PII3 467 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
U2AF1-212ENST00000496462 SLC45A1Q9Y2W3 748 aa9.94□□□□□ -0.82
U2AF1-212ENST00000496462 ROBO3Q96MS0 1386 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 K7ELQ4 463 aaPredicted RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 NDUFB10O96000 172 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 SLC10A3P09131 477 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 CTCFP49711 727 aaPredicted RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 SF3A1Q15459 793 aaKnown RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 C8orf76Q96K31 380 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 LLPHQ9BRT6 129 aaKnown RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 TEX13BQ9BXU2 312 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 TRPA1O75762 1119 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 STAT3P40763 770 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 GABPAQ06546 454 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 C8orf34Q49A92 452 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 TRMT44Q8IYL2 757 aaKnown RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 ZIC5Q96T25 663 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 ABCB11O95342 1321 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 NEDD4P46934 1319 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 PTPDC1A2A3K4 754 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 MB21D2Q8IYB1 491 aaPredicted RBP9.93□□□□□ -0.82
U2AF1-212ENST00000496462 TEPSINQ96N21 525 aa9.93□□□□□ -0.82
U2AF1-212ENST00000496462 POTEB2H3BUK9 544 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 IRF6O14896 467 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms