RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 SLC15A5A6NIM6 579 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 FAM47AQ5JRC9 791 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 WDR78Q5VTH9 848 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 CWC27Q6UX04 472 aaKnown RBP20.22■□□□□ 0.83
COMMD3-214ENST00000496071 SHCBP1Q8NEM2 672 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 USP6NLQ92738 828 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 ATG4CQ96DT6 458 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 SPATC1LQ9H0A9 340 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 ADAMTS5Q9UNA0 930 aa20.22■□□□□ 0.83
COMMD3-214ENST00000496071 STRNO43815 780 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 ORC4O43929 436 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 FGRP09769 529 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 PTPREP23469 700 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 GJA8P48165 433 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 MAP2K5Q13163 448 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 FAM83BQ5T0W9 1011 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 MOV10L1Q9BXT6 1211 aaKnown RBP20.21■□□□□ 0.83
COMMD3-214ENST00000496071 UNC93B1Q9H1C4 597 aa20.21■□□□□ 0.83
COMMD3-214ENST00000496071 NDUFB10O96000 172 aa20.2■□□□□ 0.82
COMMD3-214ENST00000496071 PCP11498 1178 aaKnown RBP20.2■□□□□ 0.82
COMMD3-214ENST00000496071 GMCL1P1Q8NEA9 526 aa20.2■□□□□ 0.82
COMMD3-214ENST00000496071 APBA2Q99767 749 aa20.2■□□□□ 0.82
COMMD3-214ENST00000496071 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
COMMD3-214ENST00000496071 MROH8Q9H579 483 aa20.2■□□□□ 0.82
COMMD3-214ENST00000496071 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
COMMD3-214ENST00000496071 CENPFP49454 3210 aa20.19■□□□□ 0.82
COMMD3-214ENST00000496071 RANBP6O60518 1105 aaKnown RBP20.19■□□□□ 0.82
COMMD3-214ENST00000496071 SLC25A27O95847 323 aa20.19■□□□□ 0.82
COMMD3-214ENST00000496071 PLS1Q14651 629 aa20.19■□□□□ 0.82
COMMD3-214ENST00000496071 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
COMMD3-214ENST00000496071 TRIB2Q92519 343 aa20.19■□□□□ 0.82
COMMD3-214ENST00000496071 FBXO28Q9NVF7 368 aa20.19■□□□□ 0.82
COMMD3-214ENST00000496071 RPTORQ8N122 1335 aa20.19■□□□□ 0.82
COMMD3-214ENST00000496071 VWA5AO00534 786 aa20.18■□□□□ 0.82
COMMD3-214ENST00000496071 SGPL1O95470 568 aa20.18■□□□□ 0.82
COMMD3-214ENST00000496071 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
COMMD3-214ENST00000496071 GRB14Q14449 540 aa20.18■□□□□ 0.82
COMMD3-214ENST00000496071 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
COMMD3-214ENST00000496071 U2AF1L4Q8WU68 220 aaKnown RBP20.18■□□□□ 0.82
COMMD3-214ENST00000496071 SLF1Q9BQI6 1058 aa20.18■□□□□ 0.82
COMMD3-214ENST00000496071 HMX1Q9NP08 348 aaPredicted RBP20.18■□□□□ 0.82
COMMD3-214ENST00000496071 INCENPQ9NQS7 918 aa20.18■□□□□ 0.82
COMMD3-214ENST00000496071 PAK6Q9NQU5 681 aaPredicted RBP20.18■□□□□ 0.82
COMMD3-214ENST00000496071 TOMM22Q9NS69 142 aa20.18■□□□□ 0.82
COMMD3-214ENST00000496071 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
COMMD3-214ENST00000496071 HOXC6P09630 235 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
COMMD3-214ENST00000496071 ERCC3P19447 782 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 TMEM132BQ14DG7 1078 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 SLFN13Q68D06 897 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 MFSD6Q6ZSS7 791 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
COMMD3-214ENST00000496071 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.17■□□□□ 0.82
COMMD3-214ENST00000496071 RNF41Q9H4P4 317 aaPredicted RBP20.17■□□□□ 0.82
COMMD3-214ENST00000496071 FEM1BQ9UK73 627 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 STX8Q9UNK0 236 aa20.17■□□□□ 0.82
COMMD3-214ENST00000496071 ZNF213O14771 459 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 TNRC18O15417 2968 aaPredicted RBP20.16■□□□□ 0.82
COMMD3-214ENST00000496071 COPB2P35606 906 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 NT5C2P49902 561 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 AKNAD1Q5T1N1 836 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 NCAPG2Q86XI2 1143 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 RIOX2Q8IUF8 465 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 ABRAQ8N0Z2 381 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 LRRC47Q8N1G4 583 aaKnown RBP20.16■□□□□ 0.82
COMMD3-214ENST00000496071 RUFY2Q8WXA3 655 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 SHISA4Q96DD7 197 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 DEFB118Q96PH6 123 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 IL17RBQ9NRM6 502 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 TCP11L1Q9NUJ3 509 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 SLC5A4Q9NY91 659 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 TACC3Q9Y6A5 838 aa20.16■□□□□ 0.82
COMMD3-214ENST00000496071 BMP3P12645 472 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 STAT3P40763 770 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 NOVP48745 357 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 HAND2P61296 217 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 RRP12Q5JTH9 1297 aaKnown RBP20.15■□□□□ 0.82
COMMD3-214ENST00000496071 MAP3K21Q5TCX8 1036 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 DPP9Q86TI2 863 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 GMCL1Q96IK5 515 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 CTNNA3Q9UI47 895 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
COMMD3-214ENST00000496071 ZNF236Q9UL36 1845 aa20.15■□□□□ 0.82
COMMD3-214ENST00000496071 RAD50Q92878 1312 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 ZBED4O75132 1171 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 TFRCP02786 760 aaKnown RBP20.14■□□□□ 0.81
COMMD3-214ENST00000496071 FDX1P10109 184 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 FCER1AP12319 257 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 TRIM32Q13049 653 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 CCL14Q16627 93 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 MFSD14CQ5VZR4 134 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 REPS2Q8NFH8 660 aa20.14■□□□□ 0.81
COMMD3-214ENST00000496071 ZNF214Q9UL59 606 aaPredicted RBP20.14■□□□□ 0.81
COMMD3-214ENST00000496071 NMT2O60551 498 aa20.13■□□□□ 0.81
COMMD3-214ENST00000496071 PRKAR2AP13861 404 aaKnown RBP20.13■□□□□ 0.81
COMMD3-214ENST00000496071 ADORA2AP29274 412 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms